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Job DescriptionP23883
Confidence100.00%DateThu Jan 5 11:40:20 GMT 2012
Rank31Aligned Residues465
% Identity32%Templatec3ju8B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:succinylglutamic semialdehyde dehydrogenase; PDBTitle: crystal structure of succinylglutamic semialdehyde dehydrogenase from2 pseudomonas aeruginosa.
Resolution1.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
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Query Sequence  ENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHA
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Template Sequence  XSTHYIAGQWLAG. QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP. . AWARRPLEQRIELLERFAATLKSRA
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TT

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   2.......10.... .....20.........30.........40.........50... ......60.........70........
 
   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  EELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKL
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Template Sequence  DELARVIGEETGKPLWES. ATEVTSXVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHI
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   7980.........90...... ...100.........110.........120.........130.........140.........150.......
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  GPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGD
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Template Sequence  VPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG. GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG
Template Known Secondary structure  T


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   158.160.........170.........180.........190.........200. ........210.........220.........230......
 
   259260.........270.........280.........290.........300.........310..... ....320.........330.... ..
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Query Sequence  SNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIA. DEFLALLKQQAQNWQPGHP. LD
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Template Sequence  QPQKILALEXGGNNPLVVEEV. ADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQ
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TGGGG
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B

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   237..240.........250....... ..260.........270.........280.........290.........300.........310.....
 
   337..340.........350.........360.........370. ........380.........390.........400.........410....
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Query Sequence  PATTMGTLIDCAHADSVHSFIREGESKGQLLLDGR. . NAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQA
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Template Sequence  PAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAALLTPGIL. DVSAVAERPDEEFFGPLLQVIRYSDFAAA
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   316...320.........330.........340.........350.........360..... ....370.........380.........390....
 
   415....420.........430.........440.........450........ .460.........470.........480.........490
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Query Sequence  LQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGD. MTVPFGGYKQSGNGRDKSLHALEKFTELKTIW
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Template Sequence  IREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAYPVASL
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SS

S
S


SSSS
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   395....400.........410.........420.........430.........440.........450.........460.........470.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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