Job Description P23883 Confidence 100.00% Date Thu Jan 5 11:40:20 GMT 2012 Rank 19 Aligned Residues 474 % Identity 35% Template c3ifgH_ PDB info PDB header:oxidoreductase Chain: H: PDB Molecule:succinate-semialdehyde dehydrogenase (nadp+); PDBTitle: crystal structure of succinate-semialdehyde dehydrogenase from2 burkholderia pseudomallei, part 1 of 2 Resolution 2.70 Å

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		15	.	.					.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		S	L	A	.	.	.	.	I	E	N	R	L	F	I	N	G	E	Y	T	A	A	A	E	N	E	T	F	E	T	V	D	P	V	T	Q	A	P	L	A	K	I	A	R	G	K	S	V	D	I	D	R	A	M	S	A	A	R	G	V	F	E	R	G	D	W	S	L	S	S	P	A	K	R	K	A	V	L	N	K	L
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.																																																							.	.
Template Conservation																																																															.	.
Template Sequence		S	M	K	D	P	S	L	L	R	H	Q	A	Y	I	G	G	E	W	Q	A	A	D	S	D	A	T	F	E	V	F	D	P	A	T	G	E	S	L	G	T	V	P	K	M	G	A	A	E	T	A	R	A	I	E	A	A	Q	A	A	W	A	.	.	G	W	R	M	K	T	A	K	E	R	A	A	I	L	R	R	W
Template Known Secondary structure			S	S	S	G	G	G	S			S				T	T						T	T									T	T	T										B																		.	.					S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		A	D	L	M	E	A	H	A	E	E	L	A	L	L	E	T	L	D	T	G	K	P	I	R	H	S	L	R	D	D	I	P	G	A	A	R	A	I	R	W	Y	A	E	A	I	D	K	V	Y	G	E	.	V	A	T	T	S	S	H	E	L	A	M	I	V	R	E	P	V	G	V	I	A	A	I	V	P	W	N	F
Query Conservation																																																					.
Alig confidence																												.																									.
Template Conservation																												.
Template Sequence		F	D	L	V	I	A	N	S	D	D	L	A	L	I	L	T	T	E	Q	G	K	P	L	A	E	A	.	K	G	E	I	A	Y	A	A	S	F	I	E	W	F	A	E	E	G	K	R	V	A	G	D	T	L	P	T	P	D	A	N	K	R	I	V	V	V	K	E	P	I	G	V	C	A	A	I	T	P	W	N	F
Template Known Secondary structure								T																				.																			T	T									S	S	T	T																			S	S	S
Template Predicted Secondary structure																												.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	L	T	C	W	K	L	G	P	A	L	A	A	G	N	S	V	I	L	K	P	S	E	K	S	P	L	S	A	I	R	L	A	G	L	A	K	E	A	G	L	P	D	G	V	L	N	V	V	T	G	F	G	H	E	A	G	Q	A	L	S	R	H	N	D	I	D	A	I	A	F	T	G	S	T	R	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	A	M	I	A	R	K	V	G	P	A	L	A	A	G	C	P	I	V	V	K	P	A	E	S	T	P	F	S	A	L	A	M	A	F	L	A	E	R	A	G	V	P	K	G	V	L	S	V	V	I	G	D	P	K	A	I	G	T	E	I	T	S	N	P	I	V	R	K	L	S	F	T	G	S	T	A	V	G
Template Known Secondary structure		T	T														T									S	S																T			B	T	T						B													T	T								S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	L	L	K	D	A	G	D	S	N	M	K	R	V	W	L	E	A	G	G	K	S	A	N	I	V	F	A	D	C	P	D	L	Q	Q	A	A	S	A	T	A	A	G	I	F	Y	N	Q	G	Q	V	C	I	A	G	T	R	L	L	L	E	E	S	I	A	D	E	F	L	A	L	L	K	Q	Q	A	Q	N	W
Query Conservation
Alig confidence										.																						.
Template Conservation										.																						.
Template Sequence		R	L	L	M	A	Q	S	A	.	P	T	V	K	K	L	T	L	E	L	G	G	N	A	P	F	I	V	F	D	D	.	A	D	L	D	A	A	V	E	G	A	I	A	S	K	Y	R	N	N	G	Q	T	C	V	C	T	N	R	F	F	V	H	E	R	V	Y	D	A	F	A	D	K	L	A	A	A	V	S	K	L
Template Known Secondary structure								T	G	.	G	G	T																	T	T	.															S	G	G	G	G		S	T	T									G	G	G														T	S
Template Predicted Secondary structure										.																						.
Template SS confidence
		241	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		Q	P	G	H	P	L	D	P	A	T	T	M	G	T	L	I	D	C	A	H	A	D	S	V	H	S	F	I	R	E	G	E	S	K	G	Q	L	L	L	D	G	R	.	.	N	A	G	L	A	A	A	I	G	P	T	I	F	V	D	V	D	P	N	A	S	L	S	R	E	E	I	F	G	P	V	L	V	V	T	R
Query Conservation																																												.	.
Alig confidence																																												.	.
Template Conservation
Template Sequence		K	V	G	R	G	T	E	S	G	A	T	L	G	P	L	I	N	E	A	A	V	K	K	V	E	S	H	I	A	D	A	L	A	K	G	A	S	L	M	T	G	G	K	R	H	A	L	G	H	G	F	F	E	P	T	V	L	T	G	V	K	P	D	M	D	V	A	K	E	E	T	F	G	P	L	A	P	L	F	R
Template Known Secondary structure			B			T	T	S	T	T			B				S	S																		T								S	B		T	T		T	T		B										T	T	S	G	G	G	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	S	E	E	Q	A	L	Q	L	A	N	D	S	Q	Y	G	L	G	A	A	V	W	T	R	D	L	S	R	A	H	R	M	S	R	R	L	K	A	G	S	V	F	V	N	N	Y	N	D	G	D	M	T	V	P	F	G	G	Y	K	Q	S	G	N	G	R	D	K	S	L	H	A	L	E	K	F	T	E	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	S	E	E	E	L	V	R	L	A	N	D	T	E	F	G	L	A	A	Y	L	Y	S	R	D	I	G	R	V	W	R	V	A	E	A	L	E	Y	G	M	V	G	I	N	T	G	L	I	S	N	E	V	A	P	F	G	G	V	K	Q	S	G	L	G	R	E	G	S	H	Y	G	I	D	D	Y	V	V	I	K
Template Known Secondary structure															S	S			S																						S					S		S					S	S	S		B			S	G	G	G			S		B	S	T	T	T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
		488	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	W	I	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	C	V	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.