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Job DescriptionP23883
Confidence100.00%DateThu Jan 5 11:40:20 GMT 2012
Rank22Aligned Residues466
% Identity35%Templatec3i44A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from bartonella2 henselae at 2.0a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
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Query Sequence  ENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHA
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Template Conservation       
 
            
  
 

  
          
  

  
  
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Template Sequence  KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ. . TWKTTSPHERLGFVEKILEIYEKRS
Template Known Secondary structure 

TT

SS

TTTT


..TTS
T
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   4.....10.........20.........30.........40.........50...... ...60.........70.........80.
 
   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  EELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKL
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Template Sequence  SDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKV
Template Known Secondary structure 


T

SSSTT
SS




SSS
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  GPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGD
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Template Sequence  IPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS.
Template Known Secondary structure  T


TTS
TT

TTS



TTT
TT

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   162.......170.........180.........190.........200.........210.........220.........230.........240
 
   259260.........270.........280.........290.........300.........310.........320.........330........
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Query Sequence  SNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPA
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Template Sequence  NTLKRVCLELGGKGANIIFAD. ADID. ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTG
Template Known Secondary structure  TTT






TT.S
TT.GGGG

TT


GGG

B

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S
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   241........250.........260. .... ....270.........280.........290.........300.........310........
 
   339340.........350.........360.........370.. .......380.........390.........400.........410...
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Query Sequence  TTMGTLIDCAHADSVHSFIREGESKGQLLLDGRN. . . . . AGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ
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Template Conservation     
              
  
   

 
  

         
    



            
 




 
      

Template Sequence  NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDE
Template Known Secondary structure  S
B


S
TT


SS

TT

SS




S

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   319320.........330.........340.........350.........360.........370.........380.........390........
 
   414.....420.........430.........440.........450.........460.........470.........480.........490
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Query Sequence  ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIW
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Template Sequence  AVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHEL. PGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS
Template Known Secondary structure 
SS

S
S
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STT


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SGGG



BSTTS
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   399400.........410.........420.........430.........440. ........450.........460.........470....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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