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Job DescriptionP23883
Confidence100.00%DateThu Jan 5 11:40:20 GMT 2012
Rank34Aligned Residues469
% Identity25%Templatec2vroB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from2 burkholderia xenovorans lb400
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
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Query Sequence  LAIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSPAKRKAVLNKLADLME
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Template Sequence  MTELLKNHVAGQWIAG. TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGA. . ALRALTYAQRAARLADIVKLLQ
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TT

.SSS

TTT



TT

..S
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   1........10...... ...20.........30.........40.........50..... ....60.........70.......
 
   96...100.........110.........120.........130.........140. ........150.........160.....
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Query Sequence  AHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGE. . . . . . . . . . VATTSSHELAMIVREPVGVIAAIV
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Template Sequence  AKRGDYYAIATANSGTTRNDS. AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFIN
Template Known Secondary structure  T


.TT
S
S
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   78.80.........90........ .100.........110.........120.........130.........140.........150......
 
   166...170.........180.........190.........200..... ....210.........220.........230.........240....
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Query Sequence  PWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAG. LAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTG
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Template Sequence  AFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG. . . LLDQIRSFDVVSFTG
Template Known Secondary structure 
TT
TTTT



GGGT
S
TTS

S

TT...TGGG

TT
S
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   157..160.........170.........180.........190.........200.........210........ .220.........230...
 
   245....250........ .260.........270.........280.. .......290.........300.........310........
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Query Sequence  STRTGKQLLKDAGD. SNMKRVWLEAGGKSANIVFADCPD. . . . . LQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEF
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Template Sequence  SADTAATLRAHPAFVQRGARLNVEADSLNSAILCAD. ATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPV
Template Known Secondary structure 
TSTT






TT.

TTSGGGG

TT
GGG
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   234.....240.........250.........260......... 270.........280.........290.........300.........310..
 
   319320.........330.........340.........350.........360.........370. ........380.... .....
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Query Sequence  LALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGR. . . . . . . NAGLAAAIGPTIF. . VDVDP
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Template Sequence  LEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDN
Template Known Secondary structure  TT

BB
TTSTT
SB


S
TTS
TTS

BSS
TTTS





S
TTT
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   313......320.........330.........340.........350.........360.........370.........380.........390..
 
   390.........400......... 410.........420.........430.........440.........450.......
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Query Sequence  NASLSREEIFGPVLVVTRFT. . . . SEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDG. . . . . . . .
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Template Sequence  ATLLHDVEVFGPVASVAPYRVTALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGH
Template Known Secondary structure 
SSTTT



SS




TTTTSS
S
TTT
GGGTTT


S
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   393......400.........410.........420.........430.........440.........450.........460.........470..
 
   458.460.........470...... ...480.........490..
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Query Sequence  . . . DMTVPFGGYKQSGNGRDKS. LHALEKFTELKTIWIS
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Template Sequence  GNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA
Template Known Secondary structure  S


TTS

SGGG
S

SGGGGGGGG
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   477..480.........490.........500.........510.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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