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Job DescriptionP23883
Confidence100.00%DateThu Jan 5 11:40:20 GMT 2012
Rank11Aligned Residues484
% Identity25%Templatec2jg7G_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:antiquitin; PDBTitle: crystal structure of seabream antiquitin and elucidation of2 its substrate specificity
Resolution2.83 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSP
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Template Sequence  INQPKYSWL. . KELGLSEDNPGVYNGSWG. . GSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWK. . MWADIPA
Template Known Secondary structure  GGSGGGGGG..GGGT

S
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TTTT


..TTS
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   5....10... ......20.........30. ........40.........50.........60.........70. .......
 
   81........90.........100.........110.........120.........130.........140... ......150.........
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Query Sequence  AKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVA. TTSSHELAMIVREPVG
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Template Sequence  PKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEG. VGEVQEYVDVCDYAVGLSRMIGGPVLPSERPGHALIEQWNPVG
Template Known Secondary structure  T


.TTT




SSTT
S
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   7980.........90.........100.........110.... .....120.........130.........140.........150.......
 
   160.........170.........180.........190.........200.........210 .........220.........230.....
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Query Sequence  VIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEA. . . . GLPDGVLNVVTGFGHEAGQALSRHN
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Template Sequence  LVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGG. ADIGTAMAKDE
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SSSTTTT


TT
TT

GGG

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   158.160.........170.........180.........190.........200.........210.........220..... ....230......
 
   236...240.........250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  DIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIA
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Template Sequence  RVDLLSFTGSTHVGKMVAMMVQ. ERFGRKLLELGGNNAIIVFED. ADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVH
Template Known Secondary structure  T
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TT.S
GGGG
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   237..240.........250........ .260.........270......... 280.........290.........300.........310....
 
   316...320.........330.........340.........350.........360.........370. ........380.........390...
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Query Sequence  DEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGR. . NAGLAAAIGPTIFVDVDPNASL
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Template Sequence  DAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAPI
Template Known Secondary structure  TT

B

TTSTT
SB


SSTT


SB
SSSSS
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TT
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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   394.....400.........410.........420.........430.........440 .........450........ .460.........470
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Query Sequence  SREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRM. . SRRLKAGSVFVNNYNDGD. MTVPFGGYKQSG
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Template Sequence  VHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTG
Template Known Secondary structure  S


SS

SS

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STTS

SSSS
TT


TTS

SGGG
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   395....400.........410.........420.........430.........440.........450.........460.........470....
 
   471........480.........490....
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Query Sequence  NGRDKSLHALEKFTELKTIWISLE
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Template Sequence  GGRESGSDSWKQYMRRSTCTINYS
Template Known Secondary structure  S

STTGGGGG
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   475....480.........490........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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