Job Description P23883 Confidence 100.00% Date Thu Jan 5 11:40:20 GMT 2012 Rank 10 Aligned Residues 470 % Identity 43% Template c2d4eB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:5-carboxymethyl-2-hydroxymuconate semialdehyde PDBTitle: crystal structure of the hpcc from thermus thermophilus hb8 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	R	L	F	I	N	G	E	Y	T	A	A	A	E	N	E	T	F	E	T	V	D	P	V	T	Q	A	P	L	A	K	I	A	R	G	K	S	V	D	I	D	R	A	M	S	A	A	R	G	V	F	E	R	G	D	W	S	L	S	S	P	A	K	R	K	A	V	L	N	K	L	A	D	L	M	E	A	H	A
Query Conservation
Alig confidence																																																							.	.
Template Conservation																																																							.	.
Template Sequence		P	A	L	H	F	I	A	G	E	F	V	P	S	E	S	G	E	T	F	P	S	L	D	P	A	T	N	E	V	L	G	V	A	A	R	G	G	E	R	E	V	D	R	A	A	K	A	A	H	E	A	F	Q	.	.	R	W	S	R	T	K	A	K	E	R	K	R	Y	L	L	R	I	A	E	L	I	E	K	H	A
Template Known Secondary structure			B					T	T						T	T									T	T	T	T																											.	.					S																			T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		E	E	L	A	L	L	E	T	L	D	T	G	K	P	I	R	H	S	L	R	D	D	I	P	G	A	A	R	A	I	R	W	Y	A	E	A	I	D	K	.	V	Y	G	E	V	A	T	T	S	S	H	E	L	A	M	I	V	R	E	P	V	G	V	I	A	A	I	V	P	W	N	F	P	L	L	L	T	C	W	K
Query Conservation																																									.
Alig confidence																				.																					.
Template Conservation																				.
Template Sequence		D	E	L	A	V	M	E	C	L	D	A	G	Q	V	L	R	I	V	.	R	A	Q	V	A	R	A	A	E	N	F	A	F	Y	A	E	Y	A	E	H	A	M	E	D	R	T	F	P	V	D	R	D	W	L	Y	Y	T	V	R	V	P	A	G	P	V	G	I	I	T	P	W	N	A	P	L	M	L	S	T	W	R
Template Known Secondary structure																				.																T	T	G	G	G	T	T								T	T	T																			S	S	S
Template Predicted Secondary structure																				.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	P	A	L	A	A	G	N	S	V	I	L	K	P	S	E	K	S	P	L	S	A	I	R	L	A	G	L	A	K	E	A	G	L	P	D	G	V	L	N	V	V	T	G	F	G	H	E	A	G	Q	A	L	S	R	H	N	D	I	D	A	I	A	F	T	G	S	T	R	T	G	K	Q	L	L	K	D	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	P	A	L	A	F	G	N	T	V	V	L	K	P	A	E	W	S	P	F	T	A	T	K	L	A	E	I	L	K	E	A	D	L	P	P	G	V	F	N	L	V	Q	G	F	G	E	E	A	G	A	A	L	V	A	H	P	L	V	P	L	L	T	L	T	G	E	T	E	T	G	K	I	V	M	R	N	A	A
Template Known Secondary structure								T	T									T	T	S														T	T			T	T	S								T	T	T									T	T								S													G
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	N	M	K	R	V	W	L	E	A	G	G	K	S	A	N	I	V	F	A	D	C	P	D	L	Q	Q	A	A	S	A	T	A	A	G	I	F	Y	N	Q	G	Q	V	C	I	A	G	T	R	L	L	L	E	E	S	I	A	D	E	F	L	A	L	L	K	Q	Q	A	Q	N	W	Q	P	G	H	P	L	D	P
Query Conservation
Alig confidence		.																						.
Template Conservation		.																						.
Template Sequence		.	D	H	L	K	R	L	S	P	E	L	G	G	K	S	P	A	L	V	F	A	D	.	A	D	L	E	R	A	L	D	A	V	V	F	Q	I	F	S	F	N	G	E	R	C	T	A	S	S	R	L	L	V	E	E	K	I	F	E	D	F	V	G	K	V	V	E	R	A	R	A	I	R	V	G	H	P	L	D	P
Template Known Secondary structure		.	G	G	T																	T	T	.	S															G	G	G	G		S	T	T																									T			B			T	T	S	T
Template Predicted Secondary structure		.																						.
Template SS confidence
			263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.											.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	T	M	G	T	L	I	D	C	A	H	A	D	S	V	H	S	F	I	R	E	G	E	S	K	G	Q	L	L	L	D	G	R	.	.	.	.	.	.	.	.	.	.	N	A	G	L	A	A	A	I	G	P	T	I	F	V	D	V	D	P	N	A	S	L	S	R	E	E	I	F	G	P	V	L	V	V	T	R
Query Conservation																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																															.
Template Sequence		E	T	E	V	G	P	L	I	H	P	E	H	L	Q	R	V	L	G	Y	V	E	A	G	K	R	E	G	A	R	L	L	V	G	G	E	R	A	K	T	S	F	R	G	E	D	L	S	R	G	N	Y	L	L	P	T	V	F	V	G	E	N	.	H	M	K	I	A	Q	E	E	I	F	G	P	V	L	V	A	I	P
Template Known Secondary structure		T		S	B				S																		T	T								S	B			B		T	T	S		B		T	T	T	T		B									T	.	T	S					S				S	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	S	E	E	Q	A	L	Q	L	A	N	D	S	Q	Y	G	L	G	A	A	V	W	T	R	D	L	S	R	A	H	R	M	S	R	R	L	K	A	G	S	V	F	V	N	N	Y	N	D	G	D	M	T	V	P	F	G	G	Y	K	Q	S	G	N	G	R	D	K	S	L	H	A	L	E	K	F	T	E	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	D	E	E	E	A	L	R	K	A	N	D	T	K	Y	G	L	A	A	Y	V	F	T	R	D	L	E	R	A	H	R	L	A	L	E	L	E	A	G	M	V	Y	L	N	S	H	N	V	R	H	L	P	T	P	F	G	G	V	K	G	S	G	D	R	R	E	G	G	T	Y	A	L	D	F	Y	T	D	L	K
Template Known Secondary structure			S	S											S	S			S																			S		S	S					S	S	S					T	T	S		B			S	G	G	G	B		S		B	S
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		488	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	W	I	S	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	A	L	P	L	R
Template Known Secondary structure							S	S
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.	.	.