Job Description P0AER8 Confidence 6.10% Date Thu Jan 5 11:24:03 GMT 2012 Rank 15 Aligned Residues 94 % Identity 19% Template c2d57A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:aquaporin-4; PDBTitle: double layered 2d crystal structure of aquaporin-4 (aqp4m23) at 3.2 a2 resolution by electron crystallography Resolution 3.20 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70														.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	R	K	L	V	H	S	V	S	F	L	K	K	.	Y	T	I	P	E	P	V	A	G	G	L	L	V	A	L	A	L	L	V	L	K	K	S	M	G	W	E	V	N	F	D	M	S	L	R	D	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	A	F	F	A	T	I	G	L	N	A	N	I
Query Conservation																.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	M	V	C	T	R	K	I	S	I	A	K	S	V	F	Y	I	T	A	Q	C	L	G	A	I	I	G	A	G	I	L	Y	L	V	T	P	P	S	V	V	G	G	L	G	V	T	T	V	H	G	N	L	T	A	G	H	G	L	L	V	E	L	I	I	T	F	Q	L	V	F	T	I	F	A	S	C	D	S	K
Template Known Secondary structure								S		S																												T	T	T	G	G	G		S	S						S																											S	S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	R	A	G	G	R	V	V	G	I	F	L	I	V	V	V	G	L	L	V	M	Q	N	A	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	D	V	T	G	S	V	A	L	A	I	G	F	S	V	A	I	G	H	L	F	A	I	N	Y	T	G
Template Known Secondary structure			S				S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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