Job Description P0AER8 Confidence 28.73% Date Thu Jan 5 11:24:03 GMT 2012 Rank 2 Aligned Residues 157 % Identity 12% Template c1zcdA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:na(+)/h(+) antiporter 1; PDBTitle: crystal structure of the na+/h+ antiporter nhaa Resolution 3.45 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	T	L	T	L	L	L	G	R	K	L	V	H	S	V	S	F	L	K	K	Y	T	I	P	E	P	V	A	G	G	L	L	V	A	L	A	L	L	V	L	K	K	S	M	G	W	E	V	N	F	D	M	S	L	R	D	P	L	M	L	A	F	F	A	T	I	G	L	N	A	N	I	A	S	L	R	A	G
Query Conservation
Alig confidence																.	.	.																														.
Template Conservation																.	.	.																														.
Template Sequence		A	S	G	G	I	I	L	I	I	A	A	I	L	A	.	.	.	M	I	M	A	N	S	G	A	T	S	G	W	Y	H	D	F	L	E	T	P	V	Q	L	R	V	G	S	L	E	.	I	N	K	N	M	L	L	W	I	N	D	A	L	M	A	V	F	F	L	L	V	G	L	E	V	K	R	E	L	M	Q	G	S
Template Known Secondary structure		S														.	.	.							S	S	S								T	T								T	T			.																															S	T	T
Template Predicted Secondary structure																.	.	.																														.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		G	R	V	V	G	I	F	L	I	V	V	V	G	L	L	V	M	Q	N	A	I	G	I	G	M	A	S	L	L	G	L	D	P	L	M	G	L	L	A	G	S	I	T	L	S	G	G	H	G	T	G	A	A	W	S	K	L	F	I	E	R	Y	G	.	.	F	T	N	A	T	E	V	A	M	A	C	A	T	F	G
Query Conservation																																																																	.	.
Alig confidence						.	.	.																																																			.						.	.
Template Conservation						.	.	.																																																			.
Template Sequence		L	A	S	L	.	.	.	R	Q	A	A	F	P	V	I	A	A	I	G	G	M	I	V	P	A	L	L	Y	L	A	F	N	Y	A	D	P	I	T	R	E	G	W	A	I	P	A	A	T	D	I	A	F	A	L	G	V	L	.	A	L	L	G	S	R	V	P	L	A	L	K	I	F	L	M	A	L	A	I	I	D
Template Known Secondary structure		T	S	S	T	.	.	.	T	T	S											T	T	T	T					G	G	G			S	S	T	T					T	S	S	S	S												.		S	S		S	S	S		S	S	S
Template Predicted Secondary structure						.	.	.																																																			.
Template SS confidence
		88	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		169	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	G	G	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	G	A	I	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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