Job Description P0AER8 Confidence 3.62% Date Thu Jan 5 11:24:03 GMT 2012 Rank 44 Aligned Residues 169 % Identity 17% Template c1ldaA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glycerol uptake facilitator protein; PDBTitle: crystal structure of the e. coli glycerol facilitator (glpf) without2 substrate glycerol Resolution 2.80 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		L	G	R	K	L	V	H	S	V	S	F	L	K	K	Y	.	T	I	P	E	P	V	A	G	G	L	L	V	A	L	A	L	L	V	L	K	K	S	M	G	W	E	V	N	F	D	M	S	L	R	D	P	L	M	L	A	F	F	A	T	I	G	L	N	A	N	I	A	S	L	R	A	G	G	R	V	V	G	I	F
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		I	A	L	W	L	F	A	C	F	D	K	R	K	V	I	P	F	I	V	S	Q	V	A	G	A	F	C	A	A	A	L	V	Y	G	L	Y	Y	N	L	F	F	D	F	E	Q	T	H	H	I	V	R	G	S	V	E	S	V	D	L	A	G	T	F	S	T	Y	P	N	P	H	I	N	F	V	Q	A	F	A	V	E
Template Known Secondary structure								S				G	G	G																							T											T	T			T	T	S	G	G	G					T	T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140							.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160							.
Predicted Secondary structure																								.	.						.																	.	.	.	.	.	.											.											.	.	.	.	.	.
Query SS confidence																								.	.						.																	.	.	.	.	.	.											.											.	.	.	.	.	.
Query Sequence		L	I	V	V	V	G	L	L	V	M	Q	N	A	I	G	I	G	M	A	S	L	L	.	.	G	L	D	P	L	.	M	G	L	L	A	G	S	I	T	L	S	G	G	H	G	T	.	.	.	.	.	.	G	A	A	W	S	K	L	F	I	E	.	R	Y	G	F	T	N	A	T	E	V	.	.	.	.	.	.	A
Query Conservation																								.	.						.																	.	.	.	.	.	.											.											.	.	.	.	.	.
Alig confidence																								.	.						.																	.	.	.	.	.	.											.											.	.	.	.	.	.
Template Conservation
Template Sequence		M	V	I	T	A	I	L	M	G	L	I	L	A	L	T	D	D	G	N	G	V	P	R	G	P	L	A	P	L	L	I	G	L	L	I	A	V	I	G	A	S	M	G	P	L	T	G	F	A	M	N	P	A	R	D	F	G	P	K	V	F	A	W	L	A	G	W	G	N	V	A	F	T	G	G	R	D	I	P	Y
Template Known Secondary structure																		T	T	S	S	S			G	G	G																T																							T	T	T	T	T						S	S	S	S		T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	C	A	T	F	G	L	V	L	G	G	L	I	G	G	P	V	A	R	Y	L	V	K	H	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	V	P	L	F	G	P	I	V	G	A	I	V	G	A	F	A	Y	R	K	L	I	G	R	H
Template Known Secondary structure		T																						T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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