Return to main results Retrieve Phyre Job Id

Job DescriptionP05706
Confidence37.65%DateThu Jan 5 10:58:48 GMT 2012
Rank4Aligned Residues68
% Identity18%Templated2gp4a1
SCOP infoThe "swivelling" beta/beta/alpha domain LeuD/IlvD-like IlvD/EDD C-terminal domain-like
Resolution2.49

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60 .........70.........80.. .......90........ .100 ..... ....110.
Predicted Secondary structure 







........



.









...


.....





Query SS confidence 











. . . . . . . .





















.















. .

.




. . . . .





Query Sequence  KGALHPGLQFSL. . . . . . . . GQHRYPVTAVGSVAEDNLRELG. HVTLRFDGLNEAEFPG. . TV. HVAGP. . . . . VPDDIA
Query Conservation     
  

 
 
........
   
 




  
  

  

.
 

 
 
     


.. 
. 
   .....  
 
 
Alig confidence 











........




...













.















..

.




.....





Template Conservation   
 
  
 




 




 
 


... 

      
   
  










 
 
  
 







 






 
Template Sequence  SGALDRDCVVVVKGQGPKANGXPEL. . . HKLTPLLGSLQDKGFKVALXTDGRXSGASGKVPAAIHLTPEAIDGGLIAKVQ
Template Known Secondary structure  TTTTSSS
S
SS

B
...
SSTT

SSB
SSS

SS
S
GGGT
GGGT

Template Predicted Secondary structure 


















...




















Template SS confidence 















































































   463......470.........480....... ..490.........500.........510.........520.........530.........
 
   112.......
Predicted Secondary structure 


Query SS confidence 







Query Sequence  PGSVLKFE
Query Conservation   
  
   
Alig confidence 







Template Conservation   

 
 

Template Sequence  DGDLIRVD
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 







   540.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions