 |
Job Description | P05706 | Confidence | 10.35% | Date | Thu Jan 5 10:58:48 GMT 2012 |
Rank | 55 | Aligned Residues | 40 |
% Identity | 18% | Template | d1gl4a1 |
SCOP info | GFP-like
| GFP-like
| Domain G2 of nidogen-1
|
Resolution | 2.0 |
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | |
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | V | T | L | R | F | D | G | L | N | . |
E | A | E | F | P | G | T | V | H | V | A | G | P | V | P | D | D | I | A | P | G | S | V | L | K | F | E | S | V | K | E |
Query Conservation |   |
|   |
|
|   |
|   |
|   |   | . |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |
|   |
|   | . |
|
|   |
|   |   |   |
|   |
|   |
|   |
|
|   |
|
Template Sequence |   |
V | L | K | Q | Q | F | S | G | I | D | E | H | G | H | L | T | I | S | T | E | L | E | G | R | . |
V | P | Q | I | P | Y | G | A | S | V | H | I | E | P | Y | T | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| B |
| T | T | S |
|  |  |
|  |  |  |  |  |  |  | . |  |
|
|
|
| T | T |
|  |  |  |
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
502 | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | |
. | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|