Job Description P05706 Confidence 74.93% Date Thu Jan 5 10:58:48 GMT 2012 Rank 2 Aligned Residues 93 % Identity 13% Template c2xdpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 4c; PDBTitle: crystal structure of the tudor domain of human jmjd2c Resolution 1.56 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																														.																													.	.	.
Query SS confidence																														.																													.	.	.
Query Sequence		Y	Q	T	T	I	T	R	I	G	A	S	A	I	D	A	L	S	D	Q	M	L	I	T	F	R	E	G	A	.	P	A	D	L	E	E	Y	C	F	I	H	C	H	G	E	L	K	G	A	L	H	P	G	L	Q	F	S	L	.	.	.	G	Q	H	R	Y	P	V	T	A	V	G	S	V	A	E	D	N	L	R	E
Query Conservation																														.																													.	.	.
Alig confidence											.	.	.	.	.	.														.																													.	.	.												.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.																																																									.	.	.	.	.	.
Template Sequence		Y	S	C	R	V	M	A	V	T	.	.	.	.	.	.	S	Q	T	F	Y	E	V	M	F	D	D	G	S	F	S	R	D	T	F	P	E	D	I	V	S	R	D	C	L	K	L	G	P	P	A	E	G	E	V	V	Q	V	K	W	P	D	G	K	L	Y	G	A	K	Y	F	G	.	.	.	.	.	.	S	N	I
Template Known Secondary structure											.	.	.	.	.	.										T	T	S								G	G	G	B		S	S										T	T								T	T	S										.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.																																																									.	.	.	.	.	.
Template SS confidence
		895	.	.	.	.	900	.	.	.							.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.							960	.	.
		81	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		L	G	H	V	T	L	R	F	.	D	G	L	N	E	A	E	F	P	G	T	V	H	V	A	G	P	V	P	D	D
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		A	H	M	Y	Q	V	E	F	E	D	G	S	Q	I	A	M	K	R	E	D	I	Y	T	L	D	E	E	L	P	K
Template Known Secondary structure										T	T	S							G	G	G				S	S	S				S
Template Predicted Secondary structure
Template SS confidence
		963	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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