 |
Job Description | P05706 | Confidence | 10.09% | Date | Thu Jan 5 10:58:48 GMT 2012 |
Rank | 59 | Aligned Residues | 62 |
% Identity | 19% | Template | c1i8dB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:riboflavin synthase; |
PDBTitle: crystal structure of riboflavin synthase
|
Resolution | 2.00 Å |
|
 |
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | H | C | H | G | E | L | K | G | A | L | H | P | G | L | Q | F | S | L | G | Q | H | R | Y | P | V | T | A | V | G | S | V | A | E | D | N | L | R | E | L | G | H | V | T | L | R | F | D | G | L | N | E | A | E | F | P | G | T | V | H | V | A | G | P | V | P | D | D | I | A | P | G | S | V | L | K | F | E | S | V |
Query Conservation |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
|   |
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |   |
|
| . | . | . | . | . | . | . |
|   |   |
|   |
|   |   |
|   |   |
|   |   |
|
|
|
|
|
|
Template Sequence |   |
V | E | L | P | D | H | M | L | D | G | L | E | T | G | A | S | V | A | H | N | G | C | C | L | T | V | T | E | I | N | G | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | V | S | F | D | L | M | K | E | T | . |
. |
. |
. |
. |
. |
. |
L | R | I | T | N | L | G | D | L | K | V | G | D | W | V | N | V | E | R | A |
Template Known Secondary structure |   |
 |  |
|
| G | G | G |
| T | T |
|
| T | T |
|  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  | S | G | G | G | G |
|
| T | T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|