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Job DescriptionP69434
Confidence99.24%DateThu Jan 5 12:11:38 GMT 2012
Rank75Aligned Residues257
% Identity20%Templatec3nf1A_
PDB info PDB header:motor protein, transport proteinChain: A: PDB Molecule:kinesin light chain 1; PDBTitle: crystal structure of the tpr domain of kinesin light chain 1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   92.......100.........110.........120....... ..130.........140.........150.........160...
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Query Sequence  RHQQLPARGYAAVAVAYRNLQQWQNSLTLWQKALSL. . . . . . . . EPQNKDYQRGQILTLADAGHYDTALVKLKQLNSGAP
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Template Sequence  YEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDA. . . . .
Template Known Secondary structure  TTS
TT

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   207..210.........220.........230.........240.........250.........260.........270.........280.
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  DKANLLAEAYIYKLAGRHQDELRAMTESLPENASTQQYPTEYVQALRNNQLAAAIDDANLTPDIRADIHAELVRLSFMPT
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LAIREKTLGKDHPAVAATLNNLA
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TT
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   282.......290.........300....
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  RSESERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDRYKDVISHYQRLKKTGQIIPPWGQYWVASAY
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Template Sequence  VLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT

TT
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   305....310.........320.........330.........340.........350.........360......
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  LKDHQPKKAQSIMTELFYHKETIAPDLSDEELADLFYSHLESENYPGALTVTQHTINTSPPFLRLMGTPTSIPNDTWLQG
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Template Sequence  . . . . . . . . . . . . . . EIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEI. . . . . . . . . . . . . . . . . . . . . . LTR
Template Known Secondary structure  ..............TS
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   367..370.........380.........390.........400....... ..410
 
   404.....410.........420.........430.........440.........450.........460....
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Query Sequence  HSFLSTVAKYSNDLPQAEMTARELAYNAPGNQGLRIDYASVLQARGWPRAAENELKKAEVI
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Template Sequence  AHEREFGKPIWMHAEEREECTSFGEYGSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRS
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   411........420.........430.........440.........450.........460.........470.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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