75 c3nf1A_ Probab=99.24   E-value=2.3e-09  Score=70.13  Aligned_columns=257  Identities=20%

Q ss_pred             HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
Q ss_conf             737999899999999999749989999999999984--------599989999999999987998899999999986079
Q batch____        92 RHQQLPARGYAAVAVAYRNLQQWQNSLTLWQKALSL--------EPQNKDYQRGQILTLADAGHYDTALVKLKQLNSGAP  163 (807)
Q Consensus        92 ~~~~~~~~al~~lA~~~~~~g~~~~A~~~y~~al~~--------~P~~~~a~~~La~~~~~~g~~~eA~~~l~~~l~~~p  163 (807)
                      ...|....++..+|.+|..+|+|++|+++|+++|++        .|.....+..++.++...+++.+|...+..+     
T Consensus        17 ~ehP~~~~al~nlg~~y~~~g~~~eA~~~~~~aL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-----   91 (283)
T c3nf1A_          17 YEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDA-----   91 (283)
T ss_dssp             TTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-----
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH-----
T ss_conf             878448999999999999859989999999999997064038336334432100011111111111110000134-----


Q ss_pred             CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             97799999999997327223688777765301232799999999987399079999999887617576178999888875
Q batch____       164 DKANLLAEAYIYKLAGRHQDELRAMTESLPENASTQQYPTEYVQALRNNQLAAAIDDANLTPDIRADIHAELVRLSFMPT  243 (807)
Q Consensus       164 ~~~~~~~~a~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (807)
                                                                               .......................
T Consensus        92 ---------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~  114 (283)
T c3nf1A_          92 ---------------------------------------------------------LAIREKTLGKDHPAVAATLNNLA  114 (283)
T ss_dssp             ---------------------------------------------------------HHHHHHHHCTTCHHHHHHHHHHH
T ss_pred             ---------------------------------------------------------HHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             ---------------------------------------------------------65421000000111100001111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             52001147899998759999998665444283412335778999986378488998888875204777302343354788
Q batch____       244 RSESERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDRYKDVISHYQRLKKTGQIIPPWGQYWVASAY  323 (807)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (807)
                      ..............................................................                  
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------  176 (283)
T c3nf1A_         115 VLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL------------------  176 (283)
T ss_dssp             HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH------------------
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH------------------
T ss_conf             11100000023567765321122210111111100000000234543221112466666544------------------


Q ss_pred             HHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHH
Q ss_conf             87289324457899998722123799878999999999998799889999999998707310576430121024678899
Q batch____       324 LKDHQPKKAQSIMTELFYHKETIAPDLSDEELADLFYSHLESENYPGALTVTQHTINTSPPFLRLMGTPTSIPNDTWLQG  403 (807)
Q Consensus       324 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~la~a~~~~g~~~eA~~~l~~~l~~~p~~~~~~~~~~~~~~~~~~~~  403 (807)
                                    ....................+.......+.+..|...+.+.                      ...
T Consensus       177 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~----------------------~~~  220 (283)
T c3nf1A_         177 --------------EIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEI----------------------LTR  220 (283)
T ss_dssp             --------------HHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH----------------------HHH
T ss_pred             --------------HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----------------------HHH
T ss_conf             --------------44310001111111111111111100000012379985554----------------------355


Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf             9999999998799479999999999742799899999999999612979899999999860
Q batch____       404 HSFLSTVAKYSNDLPQAEMTARELAYNAPGNQGLRIDYASVLQARGWPRAAENELKKAEVI  464 (807)
Q Consensus       404 ~~~~a~~~~~~g~~~~A~~~l~~al~~~P~~~~~~~~lA~~~~~~g~~~~A~~~~~~al~l  464 (807)
                      ....+......++..+|+..+..++...|.++.++..+|.++..+|++++|++.|++|+++
T Consensus       221 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~~~~~~~nlg~~y~~~g~~~eA~~~~~~AL~l  281 (283)
T c3nf1A_         221 AHEREFGKPIWMHAEEREECTSFGEYGSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRS  281 (283)
T ss_dssp             HHHHHHCCCHHHHHHHHHHCCCSCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             3212578999998999999999874507264999999999999829989999999999985