Return to main results Retrieve Phyre Job Id

Job DescriptionP52005
Confidence98.64%DateThu Jan 5 12:04:53 GMT 2012
Rank4Aligned Residues154
% Identity21%Templated2rdza1
SCOP infoMultiheme cytochromes Multiheme cytochromes Di-heme elbow motif
Resolution1.74

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50..... ....60.........70.........80.. .......90.........100...
Predicted Secondary structure 









.........



















.




Query SS confidence 





















. . . . . . . . .


























.




















Query Sequence  SDTAFCLSCHSMSKPFEEYQGT. . . . . . . . . VHFSNQKGIRAECADCHIPKSGMDYLF. AKLKASKDIYHEFVSGKIDSD
Query Conservation      

 


 
         
......... 
  
  
  
 
 


 
        . 
                
  
Alig confidence 





















.........


























.




















Template Conservation       
  


          
          
       



  

 
 
 
       
         
        
Template Sequence  PLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGCADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPF
Template Known Secondary structure  SSBGGGGTTT
T
SSBGGGGTTT

S
S
B
TTSTT


B



TT

G
Template Predicted Secondary structure 




















































Template SS confidence 















































































   117..120.........130.........140.........150.........160.........170.........180.........190......
 
   104.....110.........120.........130..... ....140..
Predicted Secondary structure 






.........................................






Query SS confidence 































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .






Query Sequence  DKFEAHRQEMAETVWKELKATDSATCRSCHSF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DAMDIAS
Query Conservation       

   
           
  
  

  .........................................   
   
Alig confidence 










.............







.........................................






Template Conservation     
       .............

 


  
        
  
   
                
  
  


   
  
Template Sequence  EKAGRFDQQSM. . . . . . . . . . . . . VCGQCHVEYYFDGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQ
Template Known Secondary structure  GGS
.............TTTSS

TTTT


TT
SSTT

S
TTT





Template Predicted Secondary structure 


.............









































Template SS confidence 















































































   197..200....... ..210.........220.........230.........240.........250.........260...
 
   143......150.........160.........170.........180.........190.........200......
Predicted Secondary structure 












































Query SS confidence 































































Query Sequence  QSESAQKMHNKAQKDSETCIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSH
Query Conservation      
   
         




 

 
  
                                 
Alig confidence 






















......


































Template Conservation 
 


    
 
  




  

......

            
    
       
  

   
Template Sequence  HPEYETWTAGIHGKNNVTCIDCH. . . . . . MPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQD
Template Known Secondary structure 

STT

......S

TTS






GGGGGGGTGGGT

S
Template Predicted Secondary structure 

















......
























Template SS confidence 































































   264.....270.........280...... ...290.........300.........310.........320.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions