Job Description P52005 Confidence 99.95% Date Thu Jan 5 12:04:53 GMT 2012 Rank 1 Aligned Residues 271 % Identity 17% Template d1fgja_ SCOP info Multiheme cytochromes Multiheme cytochromes Di-heme elbow motif Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60																																				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	A	F	C	L	S	C	H	S	M	S	K	P	.	.	F	E	E	Y	Q	G	T	V	H	F	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	G	I	R	A	E	C	A	D	C	H	I	P	K	S	G
Query Conservation																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	K	D	C	V	E	C	H	S	D	E	T	P	V	W	V	R	A	W	K	R	S	T	H	A	N	L	D	K	I	R	N	L	K	S	D	D	P	L	Y	Y	K	K	G	K	L	E	E	V	E	N	N	L	R	S	M	G	K	L	G	E	K	E	T	L	K	E	V	G	C	I	D	C	H	V	D	V	N	K
Template Known Secondary structure														S									T	S	T	T	T							T			T	T	S	G	G	G																T	T	S	S		T	T													T		T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		M	D	Y	L	F	A	K	L	K	A	S	K	D	I	Y	H	E	F	V	S	G	K	I	D	S	D	D	K	F	E	A	H	R	Q	E	M	A	E	T	V	W	K	E	L	K	A	T	D	S	A	T	.	C	R	S	C	H	S	F	D	A	M	D	I	A	S	Q	S	E	S	A	Q	K	M	H	N	K	A	Q	K
Query Conservation																																																					.
Alig confidence							.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation							.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	K	A	D	.	.	.	.	.	.	.	.	.	.	H	T	K	D	I	R	M	P	T	A	D	T	C	G	T	C	H	L	R	E	F	A	E	R	E	S	E	R	D	T	M	V	W	P	N	G	Q	W	P	A	G	R	P	S	H	A	L	D	Y	T	A	N	I	E	T	T	V	W	A	T	M	P	Q	R	E
Template Known Secondary structure			S				.	.	.	.	.	.	.	.	.	.															T	T										T								T	T		S	S		T	T		S	S	S	T	T							T								S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	E	T	C	I	D	C	H	K	G	I	A	H	F	P	P	E	I	K	M	D	D	N	A	A	H	E	L	E	S	Q	A	A	T	S	V	T	N	G	A	H	I	Y	P	F	K	T	S	H	I	G	E	L	A	T	V	N	P	G	T	D	L	T	V	V	D	A	S	G	K	Q	P	I	V	L	L	Q	G	Y
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Sequence		V	A	E	G	C	T	M	C	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	Q	N	K	C	D	N	C	H	T	R	H	E	F	S	A	A	E	S	R	K	P	E	A	C	A	T	C	H	S	G	V	D	H	N	N	W	E	A	Y	.	.
Template Known Secondary structure								T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T		S	T	T	T	S		T	T	T								S	G	G	G	T	T	T	T	S		S	T	T								.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.																													.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.																.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.		.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.			.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.			.
Query Sequence		Q	M	Q	G	S	E	N	T	L	Y	L	A	A	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	A	L	A	T	L	S	E	E	G	I	K	A	L	T	V	N	G	E	W	Q	A	D	E	Y	G	N	Q	W	R	Q	A	S	L	Q	G	A	L	T	D	P	A	L	A	.	D	R	.	K
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.			.
Alig confidence		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.													.	.	.	.	.											.			.
Template Conservation		.																																														.	.													.	.	.	.	.
Template Sequence		.	T	M	S	K	H	G	K	L	A	E	M	N	R	D	K	W	N	W	E	V	R	L	K	D	A	F	S	K	G	G	Q	N	A	P	T	C	A	A	C	H	M	E	Y	E	G	.	.	E	Y	T	H	N	I	T	R	K	T	R	W	.	.	.	.	.	A	N	Y	P	F	V	P	G	I	A	E	N	I	T	S
Template Known Secondary structure		.			S										T	T	T	S		T	T	S						T	T	T	S				S								S	B	S	S	S	.	.		B		S				T	T		S	S	.	.	.	.	.		S		T	T	S	T	T	T	G	G	G	G	G	S
Template Predicted Secondary structure		.																																														.	.													.	.	.	.	.
Template SS confidence
			275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.						.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	W	Q	Y	A	E	K	L	D	D	T	Y	C	A	G	C	H	A	P	I	A	A	D	H	Y	T	V	N	A	W	P	S	I	A	K	G	M	G	A	R	T	S	M	S	E	N	E	L	D	I	L	T	R	Y	F	Q	Y
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		D	W	S	E	A	R	L	D	S	W	V	L	T	C	T	Q	C	H	S	.	.	.	.	E	R	F	A	R	S	Y	L	D	L	M	D	K	G	T	L	E	G	L	A	K	Y	Q	E	A	N	A	I	V	H	K	M	Y	E	D
Template Known Secondary structure																T	T	T	S		.	.	.	.																																			T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions