Job Description P52005 Confidence 97.78% Date Thu Jan 5 12:04:53 GMT 2012 Rank 14 Aligned Residues 117 % Identity 22% Template c3f29A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:eight-heme nitrite reductase; PDBTitle: structure of the thioalkalivibrio nitratireducens2 cytochrome c nitrite reductase in complex with sulfite Resolution 2.00 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	A	F	C	L	S	C	H	S	M	S	K	P	F	E	E	Y	Q	G	T	V	H	F	S	N	Q	K	G	I	R	A	E	C	A	D	C	H	I	P	K	S	G	M	D	Y	L	F	A	K	L	K	A	S	K	D	I	Y	H	E	F	V	S	G	K	I	D	S	D	D	K	F	E	A	H	R	Q	E	M	A
Query Conservation
Alig confidence											.	.															.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation											.	.															.	.	.	.	.	.																											.	.	.	.	.	.
Template Sequence		D	A	M	Q	C	F	D	C	H	.	.	T	Q	I	E	D	M	H	T	V	G	K	H	A	T	.	.	.	.	.	.	V	N	C	V	H	C	H	D	A	T	E	H	V	E	T	A	S	S	R	R	M	G	E	R	P	V	.	.	.	.	.	.	T	R	M	D	L	E	A	C	A	T	C	H	T	A	Q	F	N
Template Known Secondary structure								T	T		.	.								T	T	S	T	T	T	T	.	.	.	.	.	.	S		G	G	G	T											B	T	T	B			S				.	.	.	.	.	.				S	T					T	T
Template Predicted Secondary structure											.	.															.	.	.	.	.	.																											.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		115	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	V	E	V	R	H	E	S	H	P	R	L	E	K	A	T	P	T	S	R	S	P	M	F	D	K	L	I	A	G	H	G	F	A	F	E	H	A	E	P	R	S	H	A	F	M	L	V	D	H	F	V	V	D	R	A	Y	G	G	R	F	Q	F	K	N	W	Q	K	V	T	D	G	M	G	A	V	R	G	A
Template Known Secondary structure								T	T	S		T	T		B	S	S	S	T	T	S	S		T	T						T	T	S	G	G	G	G			B					G	G	G								S	T	T	T	S	T	T					S	S	G	G	G	G	G									G
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
																		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.												.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	W	K	E	L	K	A	T	D	S	A	T	C	R	S	C	H	S	F	D	A	M	D	I	A	.	.	.	.	.	.	.	.	.	.	.	S	Q	S	E	S	A	Q	K	M	H	N	K	A	Q	K	D	S	E	T	C	I	D	C	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	T	V	L	T	D	A	D	P	E	S	S	D	Q	R	R	F	L	S	Q	T	A	T	A	A	N	P	V	C	L	N	C	K	T	Q	D	H	I	L	D	W	A	Y	M	G	D	E	H	E	A	A	K	W	S	R	T	S	E	V	V	E	F	A	R	D	L	N	H	P	L	N	C	F	M	C	H
Template Known Secondary structure		G	G	T				S		T	T			S				S	S	T	T											T	T	T			T	T	T	T	T	B		G	G	G				T	T		S	B		T	T	S							T	T				S	S		G	G	G	T	B
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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