Job Description P52005 Confidence 96.03% Date Thu Jan 5 12:04:53 GMT 2012 Rank 35 Aligned Residues 124 % Identity 18% Template c2e84A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:high-molecular-weight cytochrome c; PDBTitle: crystal structure of high-molecular weight cytochrome c2 from desulfovibrio vulgaris (miyazaki f) in the presence3 of zinc ion Resolution 2.70 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		C	L	S	C	H	S	M	S	K	P	F	E	E	Y	Q	G	T	V	H	F	S	N	Q	K	G	I	R	A	E	C	A	D	C	H	I	P	K	S	G	M	D	Y	L	F	A	K	L	K	A	S	K	D	I	Y	H	E	F	V	S	.	.	.	.	.	G	K	I	D	S	D	D	K	F	E	A	H	R	Q	E	M
Query Conservation																																																													.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																																														.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.
Template Sequence		C	I	G	C	H	T	.	.	.	.	.	.	.	.	E	Q	A	K	A	G	K	K	T	G	P	Q	D	G	E	C	R	S	C	H	N	P	K	P	M	A	S	S	W	K	Q	I	G	L	D	K	S	L	H	F	R	H	V	A	A	K	A	I	A	P	V	N	D	P	Q	K	N	C	G	A	C	H	H	V	Y	D
Template Known Secondary structure								.	.	.	.	.	.	.	.					T	T							T	T						S		S	S																					S		T	T	S				S	S	S	S			G	G	G	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	V	W	K	E	L	K	A	T	D	S	A	T	C	R	S	C	H	S	F	D	A	M	D	I	A	S	Q	S	E	S	A	Q	K	M	H	N	K	A	Q	K	D	S	E	T	C	I	D	C	H	K	G	I	A	H	F	P	P	E	I	K	M	D	D
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.
Template Sequence		E	A	A	K	K	L	S	W	V	K	N	K	E	D	S	C	R	A	C	H	G	D	A	R	V	E	K	K	P	S	L	R	E	A	A	H	T	Q	.	.	.	.	.	.	.	.	.	C	I	T	C	H	R	S	V	A	A	A	P	A	K	A	D	S	G	P
Template Known Secondary structure		T	T	T	T						T	T											S	S			S	S	S											.	.	.	.	.	.	.	.	.											S	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.										.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions