Job Description P52005 Confidence 96.53% Date Thu Jan 5 12:04:53 GMT 2012 Rank 25 Aligned Residues 82 % Identity 15% Template c1w5cT_ PDB info PDB header:photosynthesis Chain: T: PDB Molecule:cytochrome c-550; PDBTitle: photosystem ii from thermosynechococcus elongatus Resolution 3.2 Å

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		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.																			.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	L	Q	G	A	L	T	D	P	A	L	A	D	R	K	P	L	W	Q	Y	A	E	K	L	D	D	T	Y	C	A	G	C	H	A	P	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	H	Y	T	V	N	A	W	P	S	I	A	K	.	.	.	.	.	.	.	.	.	.
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	V	P	L	N	S	E	G	K	T	I	T	L	T	E	K	Q	Y	L	E	G	K	R	L	F	Q	Y	A	C	A	S	C	H	V	G	G	I	T	K	T	N	P	S	L	D	L	R	T	E	T	L	A	L	A	T	P	P	R	D	N	I	E	G	L	V	D	Y	M	K	N	P	T	T	Y	D	G	E	Q	E
Template Known Secondary structure						S	S	T	T	S																					T					G	G	G			S	S	S	T	T	S									T	S	S	S			S	S										S		B		T	T	S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
														336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	M	G	A	R	T	S	M	S	E	N	E	L	D	I	L	T	R	Y	F	Q	Y	N	A	K	D	I	T	E	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	E	V	H	P	S	L	R	S	A	D	I	F	P	K	M	R	N	L	T	E	K	D	L	V	A	I	A	G	H	I	L	V	E	P	K	I	L	G	D	K
Template Known Secondary structure			T	T	T	S			S	T	T	T	T	T	S	G	G	G	T	T																					G	G	G
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions