Job Description P21893 Confidence 42.16% Date Thu Jan 5 11:38:41 GMT 2012 Rank 183 Aligned Residues 60 % Identity 17% Template c8iczA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7)); PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar) Resolution 3.10 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.															.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		E	L	P	P	L	L	R	R	L	Y	A	S	R	G	V	R	S	A	Q	E	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	V	K	G	M	L	P	W	Q	Q	L	S	G	V	E	K	A	V	E	I	L	Y	N	A	F	.	.	.	R	E	G	T	R	I	I	V	V	G	D	F
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		G	I	G	P	S	A	A	R	K	F	V	D	E	G	I	K	T	L	E	D	L	R	K	N	E	D	K	L	N	H	H	Q	R	I	G	L	K	Y	F	G	D	F	E	K	R	I	P	R	E	E	M	L	Q	M	Q	D	I	V	L	N	E	V	K	K	V	D	S	E	Y	I	A	T	V	C	G	S	F
Template Known Secondary structure		T											T	T	T			S							T	G	G	G	S										T	T	T	T	T	T	S																							T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions