Job Description P21893 Confidence 61.82% Date Thu Jan 5 11:38:41 GMT 2012 Rank 82 Aligned Residues 139 % Identity 17% Template c3shoA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) Resolution 1.80 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.
Predicted Secondary structure																													.																																																.
Query SS confidence																													.																																																.
Query Sequence		E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	R	I	I	V	V	G	D	F	D	A	D	G	.	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	R	G	A	Q	.	L	I	V	T
Query Conservation																													.																																																.
Alig confidence													.										.	.	.				.																.										.	.	.	.	.	.	.	.															.
Template Conservation													.										.	.	.																				.										.	.	.	.	.	.	.	.
Template Sequence		P	E	A	I	E	A	A	V	E	A	I	.	R	A	D	H	V	I	V	V	G	.	.	.	X	G	F	S	A	A	V	A	V	F	L	G	H	G	L	N	S	L	G	.	I	R	T	T	V	L	T	E	G	.	.	.	.	.	.	.	.	G	S	T	L	T	I	T	L	A	N	L	R	P	T	D	L	X	I	G
Template Known Secondary structure													.			S							.	.	.		G	G	G														T	T	.										.	.	.	.	.	.	.	.	T									T			T	T
Template Predicted Secondary structure													.										.	.	.																				.										.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		V	D	N	G	I	S	S	H	.	.	.	A	G	V	E	H	A	R	S	L	G	I	P	V	I	V	T	D	H	H	L	P	G	D	T	L	P	A	A	E	A	I	I	N	P	N	L	R	D	C	N	F	P	S	K	S	L	A	G	V	G	V	A	F	Y	L	M	L	A	L	R	T	F	L	R	D	Q
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		V	S	V	W	R	Y	L	R	D	T	V	A	A	L	A	G	A	A	E	R	G	V	P	T	X	A	L	T	D	S	S	V	S	P	P	A	R	I	A	D	H	V	L	V	A	A	T	R	G	V	G	H	S	L	S	P	V	G	L	I	A	V	V	N	L	L	L	A	E	I	A	V	R	E	P	E	R
Template Known Secondary structure					S	S															T	T								S		T	T	S							S										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions