Job Description P21893 Confidence 28.16% Date Thu Jan 5 11:38:41 GMT 2012 Rank 305 Aligned Residues 96 % Identity 11% Template c3sajB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:glutamate receptor 1; PDBTitle: crystal structure of glutamate receptor glua1 amino terminal domain Resolution 2.50 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	R	G	A	Q	L	I	V
Query Conservation
Alig confidence																.													.																																		.	.	.
Template Conservation																.													.																																		.	.	.
Template Sequence		P	E	L	Q	E	A	L	I	S	I	I	D	H	Y	.	K	W	Q	T	F	V	Y	I	Y	D	A	D	.	R	G	L	S	V	L	Q	R	V	L	D	T	A	A	E	K	N	W	Q	V	T	A	V	N	I	L	T	T	T	E	E	G	Y	.	.	.	R	M	L	F	Q	D	L	E	K	K	K	E	R	L	V	V
Template Known Secondary structure																.	T												.			T	T													T								T	T	T							.	.	.										S	S	S
Template Predicted Secondary structure																.													.																																		.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	D	N	G	I	S	S	H	A	G	V	E	H	A	R	S	L	G	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	C	E	S	E	R	L	N	A	I	L	G	Q	I	V	K	L	E	K	N
Template Known Secondary structure																			T	T		S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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