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Job DescriptionP21893
Confidence53.67%DateThu Jan 5 11:38:41 GMT 2012
Rank116Aligned Residues97
% Identity12%Templatec3q41B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:glutamate [nmda] receptor subunit zeta-1; PDBTitle: crystal structure of the glun1 n-terminal domain (ntd)
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60........ .70.........80.........90.........100.........110.........120.........130..
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Query Sequence  SGVEKAVEILYNAF. . REGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPEVVDQAHARGAQL
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Template Sequence  PPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERE. SKAEKVL. . QFDPGTKNVTALLMEARELEARV
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   142.......150.........160.........170.........180........ .190..... ....200.........210........
 
   133......140.........150....
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Query Sequence  IVTVDNGISSHAGVEHARSLGI
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Template Sequence  IILSASEDDAATVYRAAAMLNM
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   219220.........230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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