Job Description P21893 Confidence 24.89% Date Thu Jan 5 11:38:41 GMT 2012 Rank 346 Aligned Residues 85 % Identity 9% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		E	I	L	Y	N	A	F	R	E	G	T	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	.	R	G	A	Q	L	I	V	T	V	D	N	G	I
Query Conservation																																																																				.
Alig confidence																			.	.	.																			.								.	.																			.									.	.	.	.	.
Template Conservation																			.	.	.																			.								.	.																												.	.	.	.	.
Template Sequence		K	D	M	E	K	I	L	E	L	D	L	T	Y	M	V	M	L	.	.	.	E	T	H	V	A	Q	L	K	A	L	V	K	Y	A	Q	A	G	G	.	K	K	V	L	L	H	A	.	.	D	L	V	N	G	L	K	N	D	D	Y	A	I	D	F	L	C	T	E	I	C	P	D	G	I	I	S	.	.	.	.	.
Template Known Secondary structure								T	T	S	S								.	.	.	S			T	T	T											T	T	.							G	.	.	G	G			T				S										T	T			S					.	.	.	.	.
Template Predicted Secondary structure																			.	.	.																			.								.	.																												.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	H	A	G	V	E	H	A	R	S	L	G	I	P	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	G	N	A	I	M	K	A	K	Q	H	K	M	L	A	I
Template Known Secondary structure		S											T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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