Job Description P21893 Confidence 42.67% Date Thu Jan 5 11:38:41 GMT 2012 Rank 177 Aligned Residues 143 % Identity 11% Template c3etnD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		G	V	E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	.	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	R	G	A	Q	L	I	V
Query Conservation																			.
Alig confidence																			.							.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																										.	.	.	.																												.	.	.	.	.	.	.
Template Sequence		A	Y	E	K	A	V	E	L	I	V	E	Q	I	H	R	K	K	G	K	L	V	T	S	G	.	.	.	.	X	G	K	A	G	Q	I	A	X	N	I	A	T	T	F	C	S	T	G	I	P	S	V	F	L	H	P	.	.	.	.	.	.	.	S	E	A	Q	H	G	D	L	G	I	L	Q	E	N	D	L	L	L
Template Known Secondary structure														T	T	T	T									.	.	.	.	S																	T	T								T	.	.	.	.	.	.	.	T	G	G	G	G	T	G	G	G	G			T	T
Template Predicted Secondary structure																										.	.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.								.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		135	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure										.	.	.										.	.																																				.	.	.	.	.	.
Query SS confidence										.	.	.										.	.																																				.	.	.	.	.	.
Query Sequence		T	V	D	N	G	I	S	S	.	.	.	H	A	G	V	E	H	A	R	S	.	.	L	G	I	P	V	I	V	T	D	H	H	L	P	G	D	T	L	P	A	A	E	A	I	I	N	P	N	L	R	D	C	N	F	P	S	.	.	.	.	.	.	K	S	L	A	G	V	G	V	A	F	Y	L	M	L	A	L	R
Query Conservation										.	.	.										.	.																																				.	.	.	.	.	.
Alig confidence										.	.	.										.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	S	N	S	G	K	T	R	E	I	V	E	L	T	Q	L	A	H	N	L	N	P	G	L	K	F	I	V	I	T	G	N	P	D	S	P	L	A	S	E	S	D	V	C	L	S	T	G	H	P	A	E	V	C	T	L	G	X	T	P	T	T	S	T	T	V	X	T	V	I	G	D	I	L	V	V	Q	T	X
Template Known Secondary structure					S	S	S																	T	T								S		T	T	S						S	S												S	T	T	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		204	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	L	R	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	T	E	F	T
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions