Job Description P21893 Confidence 100.00% Date Thu Jan 5 11:38:41 GMT 2012 Rank 4 Aligned Residues 309 % Identity 16% Template c3dmaA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:exopolyphosphatase-related protein; PDBTitle: crystal structure of an exopolyphosphatase-related protein2 from bacteroides fragilis. northeast structural genomics3 target bfr192 Resolution 2.25 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.												.	.	.	120	.	.	.	.
Predicted Secondary structure																							.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	R	I	I	V	V	G	.	.	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	L	S	P	E	V	V	D	Q
Query Conservation																							.	.																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																						.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.
Template Sequence		Q	A	H	I	D	H	F	T	K	W	F	E	R	A	D	K	I	V	I	V	S	H	V	S	P	D	G	D	A	I	G	S	S	L	G	L	Y	H	F	L	D	S	Q	D	.	K	I	V	N	V	I	V	P	N	A	F	P	D	F	L	K	W	X	P	G	S	K	D	I	L	L	Y	D	R	Y	Q	E	F	A	D
Template Known Secondary structure																S								S	S																			T	S	.								S	S				G	G	G	T	T	S	T	T	G	G	G				T	T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		A	H	A	R	G	A	Q	L	I	V	T	V	D	N	G	I	S	S	.	H	A	G	V	E	H	A	R	S	L	G	I	P	V	I	V	T	D	H	H	L	P	G	D	T	L	P	A	A	E	A	I	I	N	P	N	L	R	D	C	N	F	P	S	K	S	L	A	G	V	G	V	A	F	Y	L	M	L	A	L	R
Query Conservation																				.
Alig confidence																				.																																							.	.	.	.	.	.	.	.	.														.
Template Conservation																																																											.	.	.	.	.	.	.	.	.														.
Template Sequence		K	L	I	X	E	A	D	V	I	C	C	L	D	F	N	A	L	K	R	I	D	E	X	S	D	I	V	A	A	S	P	G	R	K	I	X	I	D	H	H	L	Y	P	E	D	F	C	R	I	T	I	S	H	P	E	I	S	.	.	.	.	.	.	.	.	.	S	T	S	E	L	V	F	R	L	I	C	R	X	.
Template Known Secondary structure								S						S		S	S	G	G	G	G	T	T										S									S	S			S		S	S						T	T	S	S	.	.	.	.	.	.	.	.	.													T	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.														.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.										.	.	.	.	.	.	150	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	L	R	D	Q	G	W	F	D	E	R	N	I	A	I	P	N	L	A	E	L	L	D	L	V	A	L	G	T	V	A	D	V	V	P	L	D	A	N	N	R	I	L	T	W	Q	G	M	S	R	I	R	A	G	K	C	R	P	G	I	K	A	L	L	E	V	A	N	R	D	A	Q	K	L	A	A	S	D	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	Y	F	S	D	I	S	K	E	G	A	E	C	I	Y	T	G	X	X	T	D	T	G	G	F	T	Y	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	R	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T		G	G	G																	T	T	T	T	T	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																																				.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	A	L	G	P	R	L	N	A	A	G	R	L	D	D	M	S	V	G	V	A	L	L	L	C	D	N	I	G	E	A	R	V	L	A	N	E	L	D	A	L	N	Q	T	R	K	E	I	E	Q	G	M	Q	I	E	A	L	T	L	C	E	K	L	E	R	S	R	D	T	L	P	G	G	L	A	M	Y	H	P
Query Conservation
Alig confidence														.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	F	I	I	S	E	L	L	S	K	G	.	.	I	D	K	D	D	I	Y	R	K	V	Y	N	T	Y	S	E	S	R	L	R	L	X	G	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	N	X	K	V	Y	K	D	Y	N	S	A	L	I	S	L	T	K	E
Template Known Secondary structure											T	T	T	.	.												S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T					T	T	T	T
Template Predicted Secondary structure														.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																						.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		364						.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		E	.	.	.	.	.	W	H	Q	G	V	V	G	I	L	A	S	R	I	K	E	R	F	H	R	P	V	I	A	F	A	P	A	G	D	G	T	L	K	G	S	G	R	S	I	Q	G	L	H	M	R	D	A	L	E	R	L	D	T	L	Y	P	G	M	M	L	K	F	G	G	H	A	M	A	A	G	L	S	L	E
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.
Template Sequence		E	Q	G	K	F	D	Y	I	K	G	D	S	E	G	F	V	N	I	P	L	S	I	K	N	V	C	F	S	C	F	L	R	E	D	T	E	X	I	K	I	S	L	R	S	V	G	K	F	P	C	N	R	L	A	A	E	.	.	.	.	.	.	.	.	F	F	N	G	G	G	H	L	N	A	S	G	G	E	F	Y
Template Known Secondary structure						T	T			T	T	T	T	T	T	G	G	G	G	G	G	G	S	T	T																					S	S	S										.	.	.	.	.	.	.	.		T	S					S	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.									.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
					439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	D	K	F	K	L	F	Q	Q	R	F	G	E	L	V	T	E
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		G	T	X	E	E	A	V	K	V	F	E	Q	A	L	E	K	Y	K	P	L
Template Known Secondary structure		S																S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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