Job Description P21893 Confidence 32.62% Date Thu Jan 5 11:38:41 GMT 2012 Rank 253 Aligned Residues 95 % Identity 19% Template c3dl8B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca Resolution 7.50 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	R	G	A	Q	L	I	V	T	V
Query Conservation
Alig confidence																										.	.	.	.																														.	.	.	.	.												.
Template Conservation																										.	.	.	.																														.	.	.	.	.												.
Template Sequence		F	K	A	V	A	E	D	V	A	Q	R	Y	M	T	G	Q	P	V	L	V	G	T	V	A	.	.	.	.	V	E	T	S	E	L	I	S	K	L	L	K	N	K	G	I	P	H	Q	V	L	N	A	K	N	H	E	R	E	.	.	.	.	.	A	Q	I	I	E	E	A	G	Q	K	G	.	A	V	T	I	A	T
Template Known Secondary structure																T								S	S	.	.	.	.															T							S	S	S						.	.	.	.	.							S	S	S	S	S	.
Template Predicted Secondary structure																										.	.	.	.																														.	.	.	.	.												.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.					.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.						.	.	470	.	.	.	.	.	.	.	.		.	480	.	.	.	.
		137	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		D	N	G	.	.	.	.	.	I	S	S	H	A	G	V	E	H	A	R	S	L	G	I	P	V	I	V	T	D	H	H	L
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.										.	.
Template Conservation																			.	.
Template Sequence		N	M	A	G	R	G	T	D	I	K	L	G	E	G	V	K	E	.	.	L	G	G	L	A	V	V	G	T	E	R	H	E
Template Known Secondary structure		T	T	T	S	S								S	S	G	G	G	.	.	S	S	S						S	S			S
Template Predicted Secondary structure																			.	.
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.			.	.	.	.	.	.	.	.	510	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions