Job Description P21893 Confidence 43.93% Date Thu Jan 5 11:38:41 GMT 2012 Rank 164 Aligned Residues 92 % Identity 21% Template c3bbnB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:ribosomal protein s2; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. Resolution 9.40 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		V	E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	R	G	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																										.	.	.	.																.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																										.	.	.	.																.	.	.	.
Template Sequence		L	S	E	A	C	D	L	V	F	D	A	S	S	R	G	K	Q	F	L	I	V	G	T	K	.	.	.	.	N	K	A	A	D	S	V	A	R	A	A	I	R	A	R	.	.	.	.	C	H	Y	V	N	K	K	W	L	G	G	M	L	T	N	W	S	T	T	E	T	R	L	H	K	F	R	D	L	R	M	E	Q
Template Known Secondary structure		T							S					T	T	T										.	.	.	.	T	T	T												T	.	.	.	.						S	S			S		S	S	S																		S	T
Template Predicted Secondary structure																										.	.	.	.																.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
																																						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	L	I	V	T	V	D	N	G	I	S	S	H	A	G	V	E	H	A	R	S	L	G	I	P	V	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																																	.
Template Sequence		T	A	G	R	L	A	R	L	P	K	R	D	A	A	V	V	K	R	Q	L	S	H	L	Q	T	Y	L	G	G	I	K	Y	M	T	G	L	P	D	I	V	I	I	V	D	Q	Q	E	.	E	Y	T	A	L	R	E	C	I	T	L	G	I	P	T	I
Template Known Secondary structure		T	S	T	T	T	T	T	S																T	T	S	T	T	S	T	T	S			S			S					S		T	T	T	.	T									T	T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions