 |
Job Description | P21893 | Confidence | 42.64% | Date | Thu Jan 5 11:38:41 GMT 2012 |
Rank | 178 | Aligned Residues | 29 |
% Identity | 21% | Template | c2zjtB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:dna gyrase subunit b; |
PDBTitle: crystal structure of dna gyrase b' domain sheds lights on2 the mechanism for t-segment navigation
|
Resolution | 2.80 Å |
|
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | T | R | I | I | V | V | G | D | F | D | A | D | G | A | T | S | T | A | L | S | V | L | A | M | R | S | L |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |
Template Sequence |   |
R | Y | H | K | I | V | L | M | A | D | A | D | V | D | G | Q | H | I | S | T | L | L | L | T | L | L | F | R | F |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |
|
| S | S | S | T | T |
| T | T |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
562 | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|