Job Description P21893 Confidence 28.47% Date Thu Jan 5 11:38:41 GMT 2012 Rank 300 Aligned Residues 88 % Identity 22% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																														.											.								.
Query SS confidence																																														.											.								.
Query Sequence		F	R	E	G	T	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	.	E	D	G	Y	G	L	S	P	E	V	.	V	D	Q	A	H	A	R	.	G	A	Q	L	I	V	T	V	D	N	G	I	S	S	H	A
Query Conservation																																														.											.								.
Alig confidence													.	.	.																	.														.											.								.
Template Conservation													.	.	.																	.
Template Sequence		L	D	E	N	T	K	A	I	V	Q	G	.	.	.	I	T	G	R	Q	G	S	F	H	T	K	K	M	L	E	C	.	G	T	K	I	V	G	G	V	T	P	G	K	G	G	Q	N	V	H	G	V	P	V	F	D	T	V	K	E	A	V	K	E	T	D	A	N	A	S	V	I	F	V	P	A	P	F	A	K	D
Template Known Secondary structure		S		T	T							T	.	.	.	T	T	S													T	.	T									T	T		T	T				T	T					S	S
Template Predicted Secondary structure													.	.	.																	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	H	A	R	S	L	G	I	P	V	I	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	F	E	A	I	D	A	G	I	E	L	I	V	V
Template Known Secondary structure									T	T		S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions