Job Description P21893 Confidence 56.42% Date Thu Jan 5 11:38:41 GMT 2012 Rank 105 Aligned Residues 93 % Identity 17% Template c2xznB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:rps0e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	S	G	V	E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	R	G	A	Q	L
Query Conservation
Alig confidence																																.	.	.	.														.	.	.	.												.	.	.
Template Conservation																																.	.	.	.														.	.	.	.												.	.	.
Template Sequence		T	W	Q	K	I	K	L	A	A	R	V	I	A	A	V	Q	H	P	E	D	V	M	V	V	C	S	R	I	Y	G	.	.	.	.	Q	R	A	A	I	K	F	A	G	Y	T	H	C	.	.	.	.	K	S	T	S	S	S	R	W	T	P	G	.	.	.	T	L	T	N	Y	Q	T	L	K	Y	E	E	P	R	V
Template Known Secondary structure																	S	S	G	G	G							S				.	.	.	.												T		.	.	.	.	B					S	S			T	T	.	.	.	T	T	T		T	T		S	S					S
Template Predicted Secondary structure																																.	.	.	.														.	.	.	.												.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	V	D	N	G	I	S	S	H	A	G	V	E	H	A	R	S	L	G	I	P	V	I
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		L	I	V	T	D	P	R	.	S	D	F	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I
Template Known Secondary structure					S		T	T	.	T	T								T	T	T	T
Template Predicted Secondary structure									.
Template SS confidence
		118	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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