Job Description P21893 Confidence 32.49% Date Thu Jan 5 11:38:41 GMT 2012 Rank 256 Aligned Residues 84 % Identity 13% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	I	L	Y	N	A	F	R	E	G	T	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	R	G	A	Q	L	I	V	T	V	D	N	G	I
Query Conservation
Alig confidence																								.	.													.	.	.	.														.	.	.	.																			.	.	.	.	.
Template Conservation																								.	.													.	.	.	.														.	.	.	.																			.	.	.	.	.
Template Sequence		M	R	A	V	Y	N	A	K	R	F	G	N	E	L	A	L	I	A	Y	K	H	S	.	.	I	V	D	K	H	E	I	E	A	M	L	G	.	.	.	.	V	K	I	K	E	F	L	F	S	S	E	D	E	.	.	.	.	I	T	T	L	I	S	K	V	K	T	E	N	I	K	I	V	V	S	.	.	.	.	.
Template Known Secondary structure									G	G	G		S								S	S		.	.	S	S										T	.	.	.	.										S	G	G	G	.	.	.	.											T	T							.	.	.	.	.
Template Predicted Secondary structure																								.	.													.	.	.	.														.	.	.	.																			.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	H	A	G	V	E	H	A	R	S	L	G	I	P	V	I	V	T	D
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	K	T	V	T	D	E	A	I	K	Q	G	L	Y	G	E	T	I	N
Template Known Secondary structure		.											T	T
Template Predicted Secondary structure		.
Template SS confidence
			147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions