Job Description P21893 Confidence 84.37% Date Thu Jan 5 11:38:41 GMT 2012 Rank 23 Aligned Residues 103 % Identity 20% Template c2nydB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:upf0135 protein sa1388; PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388 Resolution 2.00 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.															.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query Sequence		G	V	E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	.	.	.	.	.	V	P	N	R	F	E	D	G	Y	G
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																								.	.	.	.	.
Template Conservation																																											.
Template Sequence		Q	K	S	R	A	E	Q	L	I	K	Q	Y	H	P	Y	E	T	P	V	F	D	F	I	E	I	K	Q	T	S	L	Y	G	L	G	V	M	A	E	V	D	N	.	Q	M	T	L	E	D	F	A	A	D	I	K	S	K	L	N	I	P	S	V	R	F	V	G	E	S	N	Q	K	I	K	R	I	A	I	I	G	G
Template Known Secondary structure		T														S	S	S																S									.															T	T		S						S		T	T											S
Template Predicted Secondary structure																																											.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	P	E	V	V	D	Q	A	H	A	R	G	A	Q	L	I	V	T	V	D	N	G	I	S	S	H	A	G	V	E	H	A	R	S	L	G	I	P	V	I	V	T	D	H	H
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		S	G	I	G	Y	E	Y	Q	A	V	Q	Q	G	A	D	V	F	V	T	G	D	I	.	.	.	K	H	H	D	A	L	D	A	K	I	H	G	V	N	L	I	D	I	N	H	Y
Template Known Secondary structure		S		T	T	S							T	T		S					S			.	.	.											T	T								G	G
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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