Job Description P21893 Confidence 45.66% Date Thu Jan 5 11:38:41 GMT 2012 Rank 151 Aligned Residues 118 % Identity 19% Template c2nyaF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the periplasmic nitrate reductase2 (nap) from escherichia coli Resolution 2.50 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.										.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure															.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Query Sequence		E	K	A	V	E	I	L	Y	N	A	F	R	E	.	.	.	.	.	.	G	T	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	.	.	.	.	.	.	.	.	.	N	R	F	E	D	G	Y	G	L	S	P	E	V	V
Query Conservation															.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	A	F	D	V	M	E	E	K	F	K	T	A	L	K	E	K	G	P	E	S	I	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	F	K	A	G	F	R	S	N	N	I	D	P	N	A	R	H	C	M	A	S	A	V	V	G	F	M	R	T	F	G	M	D	E	P	M	G	C	Y
Template Known Secondary structure																			T		G	G	G							T	T	S															T	S								G	G	G	G	T	T												S	S		S		S			G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.																													.
Query SS confidence																		.	.	.	.	.	.	.																													.
Query Sequence		D	Q	A	H	A	R	G	A	Q	L	I	V	T	V	D	N	.	.	.	.	.	.	.	G	I	S	S	H	A	G	V	E	H	A	R	S	L	G	I	P	V	I	V	T	D	H	H	L	P	G	D	.	T	L	P	A	A	E	A	I	I	N	P
Query Conservation																		.	.	.	.	.	.	.																													.
Alig confidence					.	.												.	.	.	.	.	.	.																													.
Template Conservation					.	.
Template Sequence		D	D	I	.	.	E	Q	A	D	A	F	V	L	W	G	A	N	M	A	E	M	H	P	I	L	W	S	R	I	T	N	R	R	L	S	N	Q	N	V	T	V	A	V	L	S	T	Y	Q	H	R	S	F	E	L	A	D	N	G	I	I	F	T	P
Template Known Secondary structure		G	G	G	.	.	G	G		S						S							S													T		T	T								S	S	B		T	T	G	G	G		S							T
Template Predicted Secondary structure					.	.
Template SS confidence
		165	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions