Return to main results Retrieve Phyre Job Id

Job DescriptionP21893
Confidence28.01%DateThu Jan 5 11:38:41 GMT 2012
Rank307Aligned Residues73
% Identity10%Templatec2hqbA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional activator of comk gene; PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160.......
Predicted Secondary structure 







































Query SS confidence 












































































Query Sequence  SVLAMRSLGCSNIDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDT
Query Conservation 
   
  

   
   

 
  




    
         





 

   
 
  
   





 


     
Alig confidence 









.











...


















































Template Conservation 
       
 . 
          ...     
   
    
 

                      
  
       
Template Sequence  LLNIHSNLDV. DVVLEEGVNSEQ. . . KAHRRIKELVDGGVNLIFGHGHAFAEYFSTIHNQYPDVHFVSFNGEVKGEN
Template Known Secondary structure  S

.



S...TT


STTTTTS
TTSS



SSS
Template Predicted Secondary structure 


.




...





















Template SS confidence 












































































   23......30.. .......40.... .....50.........60.........70.........80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions