Job Description P21893 Confidence 23.86% Date Thu Jan 5 11:38:41 GMT 2012 Rank 364 Aligned Residues 153 % Identity 16% Template c2eyqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor Resolution 3.20 Å

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		2	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.
Predicted Secondary structure							.																															.	.	.																																							.	.
Query SS confidence							.																															.	.	.																																							.	.
Query Sequence		K	Q	Q	I	Q	.	L	R	R	R	E	V	D	E	T	A	D	L	P	A	E	L	P	P	L	L	R	R	L	Y	A	S	R	G	V	R	.	.	.	S	A	Q	E	L	E	R	S	V	K	G	M	L	P	W	Q	Q	L	S	G	V	E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	R	I	.	.	I
Query Conservation							.																															.	.	.																																							.	.
Alig confidence							.																															.	.	.														.																									.	.
Template Conservation																																																						.
Template Sequence		G	D	A	W	S	R	A	R	Q	K	A	A	E	K	V	R	D	V	A	A	E	L	L	D	I	Y	A	Q	R	A	A	K	E	G	F	A	F	K	H	D	R	E	Q	Y	Q	L	F	C	D	S	F	P	.	F	E	T	T	P	D	Q	A	Q	A	I	N	A	V	L	S	D	M	C	Q	P	L	A	M	D	R	L
Template Known Secondary structure			S																													T	S																		T			.	S																			S	S	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																							.	.																									.
Query SS confidence																																																							.	.																									.
Query Sequence		V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	R	.	.	G	A	Q	L	I	V	T	V	D	N	G	I	S	S	H	A	G	V	E	H	A	R	S	L	.
Query Conservation																																																							.	.																									.
Alig confidence									.																													.	.	.	.	.													.	.																									.
Template Conservation									.																													.	.	.	.	.
Template Sequence		V	C	G	D	V	G	F	.	G	K	T	E	V	A	M	R	A	A	F	L	A	V	D	N	H	K	Q	V	A	V	L	V	P	T	T	L	.	.	.	.	.	L	A	Q	Q	H	Y	D	N	F	R	D	R	F	A	N	W	P	V	R	I	E	M	I	S	R	F	R	S	A	K	E	Q	T	Q	I	L	A	E	V
Template Known Secondary structure								T	.	T	T													T	T	T								S	S			.	.	.	.	.													S	T	T	T	T							S	T	T	S
Template Predicted Secondary structure									.																													.	.	.	.	.
Template SS confidence
		626	.	.	.	630	.	.		.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660						.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
					153	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	I	P	V	I	V	T	D	H
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		A	E	G	K	I	D	I	L	I	G	T	H
Template Known Secondary structure			T	T			S						T
Template Predicted Secondary structure
Template SS confidence
		700	.	.	.	.	.	.	.	.	.	710	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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