Job Description P21893 Confidence 47.00% Date Thu Jan 5 11:38:41 GMT 2012 Rank 143 Aligned Residues 111 % Identity 26% Template c2dplA_ PDB info PDB header:ligase Chain: A: PDB Molecule:gmp synthase [glutamine-hydrolyzing] subunit b; PDBTitle: crystal structure of the gmp synthase from pyrococcus horikoshii ot3 Resolution 1.43 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	R	G	A	Q	L	I	V	T	V
Query Conservation
Alig confidence																								.	.	.	.																																	.
Template Conservation																								.	.	.	.																																	.
Template Sequence		V	E	E	K	V	R	E	I	R	E	T	V	G	D	S	K	A	I	I	A	L	S	.	.	.	.	G	G	V	D	S	S	T	A	A	V	L	A	H	K	A	I	G	D	R	L	H	A	V	F	V	N	T	G	F	L	R	K	.	G	E	P	E	F	V	V	K	T	F	R	D	E	F	G	M	N	L	H	Y	V
Template Known Secondary structure														T	T	S								.	.	.	.	S	S															G	G	G									S				T	.	T										T	T	T	T
Template Predicted Secondary structure																								.	.	.	.																																	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		137										.	.	140	.	.	.	.	.	.	.														.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	.	N	G	I	S	S	H	A	G	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	R	S	L	G	I	P	V	I	V	T	D	H	H	L	P	G	D	T	L	P	A	A	E	A	I	I	N	P
Query Conservation			.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		D	A	Q	D	R	F	F	S	A	L	K	G	V	T	D	P	E	E	K	R	K	I	I	G	R	V	F	I	E	V	F	E	E	V	A	K	K	I	G	A	E	Y	L	I	Q	G	T	I	A	P	.	.	.	.	.	L	N	L	K	L	I	E	P
Template Known Secondary structure											T	T	T																											T		S										.	.	.	.	.								T
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions