Job Description P21893 Confidence 22.75% Date Thu Jan 5 11:38:41 GMT 2012 Rank 380 Aligned Residues 60 % Identity 13% Template c2bcuA_ PDB info PDB header:transferase, lyase/dna Chain: A: PDB Molecule:dna polymerase lambda; PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch Resolution 2.20 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.														.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		E	L	P	P	L	L	R	R	L	Y	A	S	R	G	V	R	S	A	Q	E	L	E	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	G	M	L	P	W	Q	Q	L	S	G	V	E	K	A	V	E	I	L	Y	N	A	F	R	E	.	.	.	G	T	R	I	I	V	V	G	D	F
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		G	A	G	T	K	T	A	Q	M	W	Y	Q	Q	G	F	R	S	L	E	D	I	R	S	Q	A	S	L	T	T	Q	Q	A	I	G	L	K	H	Y	S	D	F	L	E	R	M	P	R	E	E	A	T	E	I	E	Q	T	V	Q	K	A	A	Q	A	F	N	S	G	L	L	C	V	A	C	G	S	Y
Template Known Secondary structure		T												T	T			S								S												T	T	T	G	G	G																								T	T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions