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Job Description | P21893 | Confidence | 41.19% | Date | Thu Jan 5 11:38:41 GMT 2012 |
Rank | 189 | Aligned Residues | 92 |
% Identity | 16% | Template | c1toaA_ |
PDB info |
PDB header:binding protein | Chain: A: PDB Molecule:protein (periplasmic binding protein troa); |
PDBTitle: periplasmic zinc binding protein troa from treponema pallidum
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Resolution | 1.80 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
A | T | S | T | A | L | S | V | L | A | M | R | S | L | G | C | S | . |
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E | D | G | Y | G | L | S | P | E | V | V | D | Q | A | H | A | R | G | A | Q | L | I | V | T | V | D | N | G | I | S | S | H | . |
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A | G | V | E | H | A | R | S | L | G | I | P | V | I | V | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | T | T | I | G | M | I | A | D | A | V | K | N | I | A | Q | G | D | V | H | L | K | G | L | M | G | P | G | V | D | P | H | L | Y | T | A | T | A | G | D | V | E | W | L | G | N | A | . |
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D | L | I | L | Y | N | G | L | H | L | E | T | K | M | G | E | V | F | S | K | L | R | G | S | R | L | V | V | A | V | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
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. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
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160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | H | H | L | P | G | D | T | L | P | A | A | E | A | I | I | N | P | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | T | I | P | V | S | Q | R | L | S | L | E | E | A | E | F | D | P | H |
Template Known Secondary structure |   |
G | G | S |
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| B | S | T | T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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