Job Description P21893 Confidence 59.78% Date Thu Jan 5 11:38:41 GMT 2012 Rank 88 Aligned Residues 94 % Identity 18% Template c1s1hB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	S	G	V	E	K	A	V	E	I	L	Y	N	A	F	R	E	G	T	R	I	I	V	V	G	D	F	D	A	D	G	A	T	S	T	A	L	S	V	L	A	M	R	S	L	G	C	S	N	I	D	Y	L	V	P	N	R	F	E	D	G	Y	G	L	S	P	E	V	V	D	Q	A	H	A	R	G	A	Q	L
Query Conservation
Alig confidence																.														.	.	.	.																.	.	.	.												.	.	.
Template Conservation																.														.	.	.	.																.	.	.	.												.	.	.
Template Sequence		T	W	E	K	L	V	L	A	A	R	I	I	A	A	.	I	P	N	P	E	D	V	V	A	I	S	S	R	.	.	.	.	T	F	G	Q	R	A	V	L	K	F	A	A	H	T	G	.	.	.	.	A	T	P	I	A	G	R	F	T	P	G	.	.	.	S	F	T	N	Y	I	T	R	S	F	K	E	P	R	L
Template Known Secondary structure																.	T	T	T	T									S	.	.	.	.													T	S	S	.	.	.	.						S				T	T	.	.	.	T	T	T	T	T	T	T	S		S				S
Template Predicted Secondary structure																.														.	.	.	.																.	.	.	.												.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	V	D	N	G	I	S	S	H	A	G	V	E	H	A	R	S	L	G	I	P	V	I	V	T
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		V	I	V	T	D	P	R	.	S	D	A	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L
Template Known Secondary structure					S		T	T	.	T	T											T
Template Predicted Secondary structure									.
Template SS confidence
		120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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