 |
Job Description | P21893 | Confidence | 20.00% | Date | Thu Jan 5 11:38:41 GMT 2012 |
Rank | 425 | Aligned Residues | 85 |
% Identity | 18% | Template | c1a4iB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase / |
PDBTitle: human tetrahydrofolate dehydrogenase / cyclohydrolase
|
Resolution | 1.50 Å |
|
 |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | F | D | A | D | G | A | T | S | T | A | L | S | V | L | A | M | R | S | L | G | C | S | N | I | D | Y | L | V | P | N | R | F | E | D | G | Y | G | L | S | P | E | V | V | D | Q | A | H | A | . |
. |
. |
. |
. |
. |
R | G | A | Q | L | I | V | T | V | D | N | G | I | S | S | H | A | G | V | E | H | A | R | S | L |
Query Conservation |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |
|   |   |
|
|
|
|
|   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |   |   |
|   |
|   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|
| . | . | . | . | . | . | . | . |
|   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |   |
Template Sequence |   |
E | K | D | V | D | G | L | T | S | I | N | A | G | R | L | A | R | G | . |
. |
. |
. |
D | L | N | D | C | F | I | P | C | . |
. |
. |
. |
. |
. |
. |
. |
T | P | K | G | C | L | E | L | I | K | E | T | G | V | P | I | A | G | R | H | A | V | V | V | G | R | S | K | I | V | G | A | P | M | H | D | L | L | L | W | N |
Template Known Secondary structure |   |
G | G | B | T | T |
|
| S |  |  |  |  |  |  |  |  | T | T | . | . | . | . |
| T | T | T | S |
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
| T | T |
|  |  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
|
|
|
. | 140 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
. | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
| . | . |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | P | V | I | V | T | D | H | H | L | P | G | . |
. |
D | T | L | P | A | A | E | A | I | I |
Query Conservation |   |
|
|
|
|
|
|   |
|
|
|   |   |   | . | . |   |   |   |
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
N | A | T | V | T | T | C | H | S | K | T | A | H | L | D | E | E | V | N | K | G | D | I | L | V |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |
| T | T |
| S | S |  |  |  |  |  | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|