Job Description P06986 Confidence 100.00% Date Thu Jan 5 10:59:42 GMT 2012 Rank 75 Aligned Residues 339 % Identity 17% Template d7aata_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		2	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.		.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure						.																																	.	.	.	.																.	.	.	.	.	.	.	.	.				.
Query SS confidence						.																																	.	.	.	.																.	.	.	.	.	.	.	.	.				.
Query Sequence		S	T	V	T	.	I	T	D	L	A	R	E	N	V	R	N	L	T	P	Y	Q	S	A	R	R	L	G	G	N	G	D	V	W	L	N	A	N	.	.	.	.	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	L	.	.	.	.	.	.	.	.	.	N	R	Y	.	P	E	C	Q	P	K	A	V	I	E	N
Query Conservation						.																																	.	.	.	.																.	.	.	.	.	.	.	.	.				.
Alig confidence						.															.	.																	.	.	.	.																.	.	.	.	.	.	.	.	.				.
Template Conservation																					.	.
Template Sequence		S	W	W	S	H	V	E	M	G	P	P	D	P	I	L	G	V	T	E	.	.	A	F	K	R	D	T	N	S	K	K	M	N	L	G	V	G	A	Y	R	D	D	N	G	K	P	Y	V	L	N	C	V	R	K	A	E	A	M	I	A	A	K	K	M	D	K	E	Y	L	P	I	A	G	L	A	D	F	T	R	A
Template Known Secondary structure			S	S	T	T															.	.								T	T								S				T	T	S																		T	T								T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		67	.	.	70	.							.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.								.	.														.	.	.
Query SS confidence							.	.	.	.	.	.								.	.														.	.	.
Query Sequence		Y	A	Q	Y	A	.	.	.	.	.	.	G	V	K	P	E	Q	V	.	.	L	V	S	R	G	A	D	E	G	I	E	L	L	.	.	.	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L
Query Conservation							.	.	.	.	.	.								.	.														.	.	.
Alig confidence							.	.	.	.	.	.								.	.														.	.	.									.
Template Conservation																																														.
Template Sequence		S	A	E	L	A	L	G	E	N	S	E	A	F	K	S	G	R	Y	V	T	V	Q	G	I	S	G	T	G	S	L	R	V	G	A	N	F	L	Q	R	F	F	K	F	S	.	R	D	V	Y	L	P	K	P	S	W	G	N	H	T	P	I	F	R	D	A	G	L	Q	L	Q	A	Y	R	Y	Y	D	P	K	T	C
Template Known Secondary structure									T	T						T	T																										T	T		.								S			T	T								T	T											T	T	T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		136	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.
Predicted Secondary structure										.	.	.	.	.	.																																					.																.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																																					.																.	.	.	.	.	.
Query Sequence		D	L	Q	G	I	S	D	K	.	.	.	.	.	.	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	.	.	.	.	.	.	S	L	A	G	W	L	A	E
Query Conservation										.	.	.	.	.	.																																					.																.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																																					.																.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	D	F	T	G	A	M	E	D	I	S	K	I	P	E	K	S	I	I	L	L	H	A	C	A	H	N	P	T	G	V	D	P	R	Q	E	Q	W	K	E	L	A	S	V	V	K	K	R	N	L	L	A	Y	F	D	M	A	Y	Q	G	F	A	S	G	D	I	N	R	D	A	W	A	L	R	H	F	I	E	Q
Template Known Secondary structure													T	T	S		T	T							S	S	S		T	T	T																			T	T								S		T	T	T	T	T	S						T									T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240										.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	.	.	.	.	.	.	.	.	.	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	.	.	.	.	.	P	Q	G	I	V	A	M	R	E	R
Query Conservation																																								.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		G	I	D	V	V	L	S	Q	S	Y	A	K	N	M	G	L	Y	G	E	R	A	G	A	F	T	V	I	C	R	D	A	E	E	A	K	R	V	E	S	Q	L	K	I	L	I	R	P	M	Y	S	N	P	P	M	N	G	A	R	I	A	S	L	I	L	N	T	P	E	L	R	K	E	W	L	V	E	V	K	G	M
Template Known Secondary structure		T										T	T	T	S			G	G	G										S	S																				S	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.
Predicted Secondary structure																						.	.	.																																																				.	.
Query SS confidence																						.	.	.																																																				.	.
Query Sequence		V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	.	.	.	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	T	R	E	E
Query Conservation																						.	.	.																																																				.	.
Alig confidence																						.	.	.																		.																				.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																										.																				.	.	.	.	.	.	.	.	.
Template Sequence		A	D	R	I	I	S	M	R	T	Q	L	V	S	N	L	K	K	E	G	S	S	H	N	W	Q	H	I	T	D	Q	I	G	M	F	C	F	T	G	L	K	.	P	E	Q	V	E	R	L	T	K	E	F	S	I	Y	M	T	K	D	G	.	.	.	.	.	.	.	.	.	R	I	S	V	A	G	V	A	S	S	N
Template Known Secondary structure																			T	T			S										S	S								.																	T	T		.	.	.	.	.	.	.	.	.				G	G	G			T	T	T
Template Predicted Secondary structure																																										.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.										.	.	.	.	390	.	.	.	.	.	.
		344	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	R	V	I	D	A	L	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	Y	L	A	H	A	I	H	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions