Job Description P06986 Confidence 99.82% Date Thu Jan 5 10:59:42 GMT 2012 Rank 191 Aligned Residues 319 % Identity 16% Template d2gsaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		26	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure														.	.						.													.	.	.	.	.	.	.	.
Query SS confidence														.	.						.													.	.	.	.	.	.	.	.
Query Sequence		L	G	G	N	G	D	V	W	L	N	A	N	.	.	E	Y	P	T	A	.	V	E	F	Q	L	T	Q	Q	T	L	N	R	.	.	.	.	.	.	.	.	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A
Query Conservation														.	.						.													.	.	.	.	.	.	.	.
Alig confidence														.	.						.													.	.	.	.	.	.	.	.																			.
Template Conservation																																																												.
Template Sequence		V	D	G	N	R	Y	I	D	Y	V	G	T	W	G	P	A	I	C	G	H	A	H	P	E	V	I	E	A	L	K	V	A	M	E	K	G	T	S	F	G	A	P	C	A	L	E	N	V	L	A	E	M	V	N	D	A	V	P	.	S	I	E	M	V	R	F	V	N	S	G	T	E	A	C	M	A	V	L	R	L
Template Known Secondary structure		T	T	S						S	S	G	G	G	T	T	T	T	T		B	T													T	T		S			S	S																S	T	.	T		S						S	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		95	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	C	E	.	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C
Query Conservation					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	R	A	Y	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	M	F	L	V	K	A	G	S	G	V	A	T	L	G	L	P	S	S	P	G	V	P	K	K	T	T	A	N	T	L	T	T	P	Y	N	D	L	E	A	V	K	A	L	F	A	E	N	P	G	E	I	A	G	V	I	L	E	P
Template Known Secondary structure															T	T					S		G	G	G		S	S								T	T			S		S	S	S						T	T						T	T										T	T	S	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V
Query Conservation																												.
Alig confidence																												.												.	.																										.
Template Conservation																																								.	.																										.
Template Sequence		I	V	G	N	S	G	F	I	V	P	D	A	G	F	L	E	G	L	R	E	I	T	L	E	H	D	A	L	L	V	F	D	E	V	M	T	G	F	.	.	R	I	A	Y	G	G	V	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	K	I	I	G	.	G	G	L	P	V	G	A	Y	G	G	K	R	E	I
Template Known Secondary structure		S	B		S	S	S		B				T	T												T	T								T	T	T	B	T	.	.	T	T	B	T	T						T	T				S						G	G	G	G	.	T	T	S
Template Predicted Secondary structure																																								.	.																										.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290
		233	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		I	N	L	L	M	K	V	I	.	.	.	.	.	.	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	A
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	L	V	A	P	A	G	P	M	Y	Q	A	G	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	L	L	R	Q	P	G	T	Y	E	Y	L	D	Q	I	T	K	R	L	S	D	G	L	L	A	I	A	Q	E	T	G	H	A	A	C	G	G	Q	V	S	G	M	F	G	F	F	F	T	E	G
Template Known Secondary structure			T	T	B	T	T	T	S	S	B					T	T	T	T																T	S	T	T																							T	T									T	T						S	S	S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
																	307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.								.
Template Conservation																																						.	.	.	.	.
Template Sequence		P	V	H	N	Y	E	D	A	K	K	S	D	L	Q	K	F	S	R	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	F	E	.	.	.	.	.	A	G	F	T	S	L	A	H	T	E	E	D	I	D	A	T	L	A	A	A	R	T
Template Known Secondary structure					S					T	T	S															T	T					S	S	T	T	S	.	.	.	.	.						T	T
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.						.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions