Job Description P06986 Confidence 99.91% Date Thu Jan 5 10:59:42 GMT 2012 Rank 148 Aligned Residues 305 % Identity 13% Template d2fnua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.				.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.									.	.	.	.	.	.																																																		.	.
Query SS confidence							.	.	.									.	.	.	.	.	.																																																		.	.
Query Sequence		P	T	A	V	E	.	.	.	F	Q	L	T	Q	Q	T	L	.	.	.	.	.	.	N	R	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	P	G	K	D	.	.	A	I	L	Y	C	P	P
Query Conservation							.	.	.									.	.	.	.	.	.																																																		.	.
Alig confidence							.	.	.									.	.	.	.	.	.																							.	.																										.	.
Template Conservation																																														.	.
Template Sequence		A	Y	S	E	P	C	L	D	K	E	D	K	K	A	V	L	E	V	L	N	S	K	Q	L	T	Q	G	K	R	S	L	L	F	E	E	A	L	C	E	F	L	G	V	K	.	.	H	A	L	V	F	N	S	A	T	S	A	L	L	T	L	Y	R	N	F	S	E	F	S	A	D	R	N	E	I	I	T	T	P	I
Template Known Secondary structure			S																		T	S	S			S	S	S															T		S	.	.						S													S	S				T	T	S							S	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I
Query Conservation
Alig confidence																																.	.																																		.	.
Template Conservation																																.	.																																		.	.
Template Sequence		S	F	V	A	T	A	N	M	L	L	E	S	G	Y	T	P	V	F	A	G	I	K	N	D	G	N	I	D	E	L	.	.	A	L	E	K	L	I	N	E	R	T	K	A	I	V	S	V	D	Y	A	G	K	S	V	E	V	E	S	V	Q	K	L	C	K	.	.	K	H	S	L	S	F	L	S	D	S	S	H	A
Template Known Secondary structure		S		T									T	T								B		T	T	S	S	B		G	G	.	.	G	S	G	G	G			T	T									G	G	G														.	.			T								T	T
Template Predicted Secondary structure																																.	.																																		.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.														.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	P	V	A	D	I	A	A	Q
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.															.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.															.
Template Sequence		L	G	S	E	Y	Q	N	K	K	V	G	G	F	A	.	L	A	S	V	F	S	F	H	A	I	K	P	I	T	.	T	A	E	G	G	A	V	V	T	N	D	S	E	L	H	E	K	M	K	L	F	R	S	H	G	M	L	K	K	D	F	F	E	G	E	V	K	S	I	G	H	N	F	R	L	N	E	I	Q	S
Template Known Secondary structure		T	T				T	T			T	T	S	S	S	.	S								T	T	S	S	S		.		S	S							S												T	B	T	T				S	S	S	S					S	S				B
Template Predicted Secondary structure																.															.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.								.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.									.	.	.
Query SS confidence																																												.	.	.	.	.	.	.									.	.	.
Query Sequence		A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	.	.	.	.	.	.	.	N	Y	I	L	A	R	F	K	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N
Query Conservation																																												.	.	.	.	.	.	.									.	.	.
Alig confidence																																												.	.	.	.	.	.	.									.	.	.
Template Conservation
Template Sequence		A	L	G	L	S	Q	L	K	K	A	P	F	L	M	Q	K	R	E	E	A	A	L	T	Y	D	R	I	F	K	D	N	P	Y	F	T	P	L	H	P	L	L	K	D	K	S	S	N	H	L	Y	P	I	L	M	H	Q	K	F	F	T	C	K	K	L	I	L	E	S	L	H	K	R	G	I	L	A	Q	V	H	Y
Template Known Secondary structure									T	T																				T	T		S	S				S	G	G	G		S	S					S								G	G	G	G	G	G											T	T				B
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		326	.	.	.	330																					.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		K	Q	P	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		K	P	I	Y	Q	Y	Q	L	Y	Q	Q	L	F	N	T	A	P	L	K	S	A	E	D	F	Y	H	A	E	I	S	L	P	C	H	A	N	L	N	L	E	S	V	Q	N	I	A	H	S	V	L
Template Known Secondary structure				G	G	G	S																													T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions