Job Description P06986 Confidence 99.87% Date Thu Jan 5 10:59:42 GMT 2012 Rank 167 Aligned Residues 311 % Identity 15% Template d2cfba1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.85

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		27	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.		.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure													.	.							.									.	.	.	.	.	.	.	.
Query SS confidence													.	.							.									.	.	.	.	.	.	.	.
Query Sequence		G	G	N	G	D	V	W	L	N	A	N	.	.	E	Y	P	T	A	V	.	E	F	Q	L	T	Q	Q	T	.	.	.	.	.	.	.	.	L	N	R	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F
Query Conservation													.	.							.									.	.	.	.	.	.	.	.
Alig confidence													.	.							.									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	N	Q	Y	I	D	Y	V	G	S	W	G	P	A	I	V	G	H	A	H	P	E	V	I	D	A	L	H	A	A	L	E	K	G	T	S	F	G	A	P	C	L	L	E	N	I	L	A	E	M	V	I	A	A	V	P	S	V	E	M	V	R	F	V	N	S	G	T	E	A	C	M	A	V	L	R	L	M	R
Template Known Secondary structure		T							S	S	T	T	T	T	T		T	T		B	T													T	T		S			S	S																	S	S		S						S	S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		A	Y	T	Q	R	E	K	V	I	K	F	E	G	C	Y	H	.	.	.	.	.	.	.	.	G	H	A	A	T	L	T	A	P	Y	N	D	L	E	A	V	S	R	L	F	E	Q	Y	P	N	D	I	A	G	V	I	L	E	P	V	V	G	N	A	G	F	I	P	P	D	A	G	F	L	E	G	L	R	E	L	T
Template Known Secondary structure					T									T				.	.	.	.	.	.	.	.										T	T												S	T	T	T								S	S	B		S	S	S		B				T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		176	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A
Query Conservation						.
Alig confidence						.																														.	.											.
Template Conservation																																				.	.											.
Template Sequence		K	Q	Y	G	A	L	L	V	F	D	E	V	M	T	G	F	R	I	A	Y	G	G	A	Q	E	K	F	G	V	T	P	D	L	T	.	.	T	L	G	K	V	I	G	G	G	L	.	P	V	G	A	Y	G	G	R	A	E	I	M	K	M	V	A	P	A	G	P	T	L	S	G	N	P	L	A	M	T	A	G	I
Template Known Secondary structure				T	T								T	T	T	T	T	T	T		T	T							T				S			.	.				G	G	G	G	T	T	S	.													T	T	S		T	T
Template Predicted Secondary structure																																				.	.											.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		255	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.																.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	L	S	P	Q	.	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	A	V	F	K	S	L	W	D	Q	G
Query Conservation								.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	L	E	I	L	S	R	P	G	S	Y	E	H	L	D	R	I	T	G	K	L	V	Q	G	L	L	D	A	A	R	E	F	G	H	E	V	C	G	G	H	I	S	G	M	F	G	L	F	F	T	A	G	P	V	T	N	Y	E	Q	A	K	Q	S	D	L	K	K	F	A	A	F	H	R	G	M	L	E	Q	G
Template Known Secondary structure								T	S	T	T																						T	T	T									T	T						S	S	S				S	S					T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation																							.
Alig confidence											.	.	.	.	.								.
Template Conservation											.	.	.	.	.
Template Sequence		I	Y	L	A	P	S	Q	F	E	.	.	.	.	.	A	G	F	T	S	L	A	H	T	E	A	D	I	E	R	T	I	A	A	A	R	T
Template Known Secondary structure						S	S	T	T	S	.	.	.	.	.						T	T
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.						.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions