Job Description P06986 Confidence 99.93% Date Thu Jan 5 10:59:42 GMT 2012 Rank 132 Aligned Residues 304 % Identity 12% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	L	N	R	Y	P	E	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	.	.	V	L	V	S	R	G	A	D	E	G
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence											.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation											.	.
Template Sequence		E	R	A	Y	N	F	N	A	G	.	.	P	A	A	L	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	Y	Q	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	L	G	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A	S	T	Q
Template Known Secondary structure									S	S	.	.	S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																		T	T			S	S							S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		I	E	L	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	.	.	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P
Query Conservation																											.	.
Alig confidence														.													.	.
Template Conservation														.
Template Sequence		F	A	M	I	P	M	N	F	L	K	E	G	.	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	E	A	S	N	Y	M	T	L	P	K	L	Q	E	I	Q	L	Q	D	N	A	A	Y	L	H	L	T	S	N	E	T	I	E	G	A	Q	F
Template Known Secondary structure												T	T	.									S														S									G	G	G	T	T		S				G	G	G					T	T								S			T	T	T	T
Template Predicted Secondary structure														.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.								.																						.	.	.	.	.	.															.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.																														.	.	.	.	.	.															.	.
Template Sequence		K	.	.	.	.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	I	L	S	R	P	F	D	L	N	Q	F	G	.	.	.	.	.	.	L	V	Y	A	G	A	Q	K	N	L	G	P	S	G	.	.	V	T	V	V	I	V	R	E	D	L	V	A	E	S	P	K	H	L	P	T	M	L
Template Known Secondary structure		S	.	.	.	.	.	.	S					T	T	S							T	T	T	T	T	S	S				G	G	G		S	.	.	.	.	.	.						T	T	T	T	T			S	S	.	.								G	G	G	S	S	S			T	T	S		G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.																														.	.	.	.	.	.															.	.
Template SS confidence
		160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
			233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.					.	.	.	300	.	.	.	.	.
Predicted Secondary structure		.																																	.	.																																	.	.	.	.
Query SS confidence		.																																	.	.																																	.	.	.	.
Query Sequence		.	I	N	L	L	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	.	.	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	.	.	.	.	T	N	Y	I	L	A	R	F	K
Query Conservation		.																																	.	.																																	.	.	.	.
Alig confidence		.																																	.	.																																	.	.	.	.
Template Conservation
Template Sequence		R	Y	D	T	Y	V	K	N	N	S	L	Y	N	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W	I	E	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	G	G	F	Y	R	G	C	V	D	V	D	S	R	S	D	M	N	I	T	F	R	L	A
Template Known Secondary structure									T	T	T		S	S																				T	T																						T	S	T	T	S	S			S	S		G	G	G	B		S	S							S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		306				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure			.	.	.																																		.	.	.
Query SS confidence			.	.	.																																		.	.	.
Query Sequence		A	.	.	.	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R
Query Conservation			.	.	.																																		.	.	.
Alig confidence			.	.	.																				.	.	.												.	.	.
Template Conservation																									.	.	.
Template Sequence		S	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	.	.	.	R	S	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E
Template Known Secondary structure																T	T			S		B			.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions