Job Description P06986 Confidence 99.83% Date Thu Jan 5 10:59:42 GMT 2012 Rank 186 Aligned Residues 313 % Identity 14% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.													.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.					.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query SS confidence																							.	.					.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query Sequence		N	E	Y	P	T	A	V	E	F	Q	L	T	Q	Q	T	L	N	R	Y	P	E	.	.	C	Q	P	K	.	.	.	.	.	.	.	.	.	.	.	.	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	C	E	.	.	.	.	.
Query Conservation																							.	.					.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Alig confidence																							.	.					.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		G	S	C	T	M	K	Y	N	P	K	L	H	E	E	A	A	R	L	F	A	D	L	H	P	Y	Q	D	P	R	T	A	Q	G	A	L	R	L	M	W	E	L	G	E	Y	L	K	A	L	T	G	M	D	A	I	T	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y	H	E	D	R	G
Template Known Secondary structure		T	T	T															T	T	S	S			T	T	S		G	G	G																				T		S							S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
				98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T
Query Conservation		.	.
Alig confidence		.	.																																																																			.	.
Template Conservation																																																																						.	.
Template Sequence		E	G	R	T	R	R	V	V	L	V	P	D	S	A	H	G	S	N	P	A	T	A	S	M	A	G	Y	Q	V	R	E	I	P	S	G	P	E	G	E	V	D	L	E	A	L	K	R	E	L	G	P	H	V	A	A	L	M	L	T	N	P	N	T	L	G	L	F	E	.	.	R	R	I	L	E	I	S	R	L	C
Template Known Secondary structure			T	T	T								T	T	S		T									T	T								B		T	T	S	S	B										S	T	T								S	S		T	T	S				.	.	T	T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.
		176	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure						.																																									.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																																									.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	.	.	.	.	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.																																									.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.															.	.	.																								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.
Template Sequence		K	E	A	G	V	Q	L	Y	Y	D	G	A	N	L	N	A	I	M	G	.	.	.	W	A	R	P	G	D	M	G	F	D	V	V	H	L	N	L	H	K	T	F	T	V	P	H	G	G	G	G	P	G	S	G	P	V	G	V	K	A	H	L	A	P	Y	L	P	V	P	L	V	E	R	G	E	E	G	F	Y	L
Template Known Secondary structure					T							G	G	G	G	G	G	T	T	T	.	.	.	T							T		S						T	T	T	T	T					T	T	S											G	G	G	G	G	G			S							S	S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
									237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.
Predicted Secondary structure		.	.	.	.	.	.	.																																																																						.	.	.
Query SS confidence		.	.	.	.	.	.	.																																																																						.	.	.
Query Sequence		.	.	.	.	.	.	.	M	K	V	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	.	A
Query Conservation		.	.	.	.	.	.	.																																																																						.	.	.
Alig confidence		.	.	.	.	.	.	.																																																																						.	.	.
Template Conservation
Template Sequence		D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G	N	F	L	A	L	V	R	A	W	A	Y	I	R	T	L	G	L	E	G	L	K	K	A	A	A	L	A	V	L	N	A	R	Y	L	K	E	L	L	K	E	K	G	Y	R	V	P	Y	D	G	P	S	M	H	E	F	V	A	Q	P	P	E	G	F	R
Template Known Secondary structure						T	T					S	S	S	T	T	S																																									T	T		B		S	S		S	S			S					B		S	T	T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A	E
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		A	L	D	L	A	K	G	L	L	E	L	G	F	H	P	P	T	V	Y	F	P	L	I	V	K	E	A	L	M	V	E	P	T	E	T	E	A	K	E	T	L	E	A	F	A	E	A	M	G	A	L
Template Known Secondary structure												T	T							S		S	T	T	S	T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions