Job Description P06986 Confidence 99.91% Date Thu Jan 5 10:59:42 GMT 2012 Rank 144 Aligned Residues 320 % Identity 15% Template d1vefa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.35

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		26	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.											.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure														.	.								.										.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.								.										.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	G	N	G	D	V	W	L	N	A	N	.	.	E	Y	P	T	A	V	E	.	F	Q	L	T	Q	Q	T	L	N	.	.	.	.	.	.	.	.	.	.	R	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I
Query Conservation														.	.								.										.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.								.										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	G	N	E	Y	I	D	C	V	G	G	Y	G	V	A	N	L	G	H	G	N	P	E	V	V	E	A	V	K	R	Q	A	E	T	L	M	A	M	P	Q	T	L	P	T	P	M	R	G	E	F	Y	R	T	L	T	A	I	L	P	P	E	L	N	R	V	F	P	V	N	S	G	T	E	A	N	E	A	A	L
Template Known Secondary structure		T	T	S						S	S					T		T	T		B	T																				T	T	S															T	S		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
			93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.																																.	.	.	.	.	.	.	.																																							.	.
Query SS confidence		.																																.	.	.	.	.	.	.	.																																							.	.
Query Sequence		.	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	.	.	.	.	.	.	.	.	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	.	.
Query Conservation		.																																.	.	.	.	.	.	.	.																																							.	.
Alig confidence		.																																.	.	.	.	.	.	.	.																																							.	.
Template Conservation
Template Sequence		K	F	A	R	A	H	T	G	R	K	K	F	V	A	A	M	R	G	F	S	G	R	T	M	G	S	L	S	V	T	W	E	P	K	Y	R	E	P	F	L	P	L	V	E	P	V	E	F	I	P	Y	N	D	V	E	A	L	K	R	A	V	D	E	E	T	A	A	V	I	L	E	P	V	Q	G	E	G	G	V	R
Template Known Secondary structure									S								T	T					S	S						T								G	G	G		S		S	S							T	T											T	T								S			T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	.	I	V	V	A	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I
Query Conservation																				.
Alig confidence																				.																							.																.
Template Conservation																																											.																.
Template Sequence		P	A	T	P	E	F	L	R	A	A	R	E	I	T	Q	E	K	G	A	L	L	I	L	D	E	I	Q	T	G	M	G	R	T	G	K	R	F	A	F	E	H	.	F	G	I	V	P	D	I	L	T	L	A	K	A	L	G	.	G	G	V	P	L	G	V	A	V	M	R	E	E	V	A	R	S	M	P	K	G	G
Template Known Secondary structure																			T								T	T	T	T	T	T	T	T	S	S	S	S	T				.		T				S						G	G	G	G	.	T	T	S	S													T	S		T	T	S
Template Predicted Secondary structure																																											.																.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.																		.	.
Query SS confidence																																																		.																		.	.
Query Sequence		A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	.	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	A	S	S	A	V	F	K	S	L	W	D	Q
Query Conservation																																																		.																		.	.
Alig confidence																				.																														.																		.	.
Template Conservation																				.
Template Sequence		H	G	T	T	F	G	G	N	P	L	A	M	A	A	G	V	A	A	.	I	R	Y	L	E	R	T	R	L	W	E	R	A	A	E	L	G	P	W	F	M	E	K	L	R	A	I	P	S	P	K	I	R	E	V	R	G	M	G	L	M	V	G	L	E	L	K	E	K	A	A	P	Y	I	A	R	L	E	K	E	H
Template Known Secondary structure		S			S	S	T	T												.								T	T																	T	S			T	T								T	T							S	S		S
Template Predicted Secondary structure																				.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		G	I	I	L	R	D	Q	N	K	Q	P	S	L	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A
Query Conservation																								.	.	.
Alig confidence									.	.	.	.	.											.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		R	V	L	A	L	Q	A	.	.	.	.	.	G	P	T	V	I	R	F	L	P	P	L	V	I	E	K	E	D	L	E	R	V	V	E	A	V	R	A
Template Known Secondary structure								S	.	.	.	.	.	S	T	T								T	T
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		359	360	.	.	.	.	.						.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions