Job Description P06986 Confidence 99.94% Date Thu Jan 5 10:59:42 GMT 2012 Rank 121 Aligned Residues 306 % Identity 15% Template d1mdoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.70

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		40	.	.	.	.							.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.									.	.	.																																												.
Query SS confidence							.	.	.	.	.	.									.	.	.																																												.
Query Sequence		P	T	A	V	E	.	.	.	.	.	.	F	Q	L	T	Q	Q	T	L	.	.	.	N	R	Y	P	E	C	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I	R	A	F	.	C	E	P	G	K	D	A	I	L	Y	C	P	P	T
Query Conservation							.	.	.	.	.	.									.	.	.																																												.
Alig confidence							.	.	.	.	.	.									.	.	.																						.	.																					.					.
Template Conservation																																													.	.																										.
Template Sequence		P	F	S	R	P	A	X	G	A	E	E	L	A	A	V	K	T	V	L	D	S	G	W	I	T	T	G	P	K	N	Q	E	L	E	A	A	F	C	R	L	T	G	N	.	.	Q	Y	A	V	A	V	S	S	A	T	A	G	X	H	I	A	L	X	A	L	G	I	G	E	G	.	D	E	V	I	T	P	S	X	T
Template Known Secondary structure			S																				T			S	S	S																	.	.	S						S													T	T			T	T	.							S	S	S
Template Predicted Secondary structure																																													.	.																										.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	M	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	D	E	A	Y	I	E
Query Conservation
Alig confidence																										.																																								.	.
Template Conservation																										.																																								.	.
Template Sequence		W	V	S	T	L	N	X	I	V	L	L	G	A	N	P	V	X	V	D	V	D	R	D	T	.	L	X	V	T	P	E	H	I	E	A	A	I	T	P	Q	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	L	D	A	I	Y	A	L	G	E	.	.	R	Y	G	I	P	V	I	E	D	A	A	H	A	T
Template Known Secondary structure												T	T								B		T	T	T	.			B											T	T							B		G	G	G														.	.			T			B					T	T		T
Template Predicted Secondary structure																										.																																								.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.											.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		F	C	P	Q	A	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	M	K	V	I	A	.	.	.	.	.	.	.	.	.	.	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																				.																								.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																				.
Template Sequence		G	T	S	Y	K	G	R	.	.	H	I	G	A	R	G	T	A	I	F	S	F	H	A	I	K	N	I	T	.	C	A	E	G	G	I	V	V	T	D	N	P	Q	F	A	D	K	L	R	S	L	K	F	H	G	L	G	V	D	Q	A	E	V	L	A	P	G	Y	K	Y	N	L	P	D	L	N	A	A	I	A	L
Template Known Secondary structure		T				T	T		.	.		T	T	S	S	S								T	T	S	S	S		.	S	S	S							S												T	B	T	T									S	S				B
Template Predicted Secondary structure									.	.																				.
Template SS confidence
		166	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.								.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.									.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.									.	.	.	.
Query Sequence		Q	G	I	V	A	M	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	.	.	.	.	.	.	.	N	Y	I	L	A	R	F	K	.	.	.	.	A	S	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	P
Query Conservation																																								.	.	.	.	.	.	.									.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		A	Q	L	Q	K	L	D	A	L	N	A	R	R	A	A	I	A	A	Q	Y	H	Q	A	X	A	D	L	P	F	Q	P	L	S	L	P	S	W	E	H	I	H	A	W	H	L	F	I	I	R	V	D	E	A	R	C	G	I	T	R	D	A	L	X	A	S	L	K	T	K	G	I	G	T	G	L	H	F	R	A	A
Template Known Secondary structure						T																					T	S	S								S	S							S												S	S												T	T	B			B						G
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		329	330																					.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	C	L	R	I	T	V	G	.	.	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A	E
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		H	T	Q	K	Y	Y	R	E	R	F	P	T	L	T	L	P	D	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	X	T	E	S	D	F	D	R	V	I	T	A	L	H	Q	I
Template Known Secondary structure		G	G	S							S	T	T											T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions